Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 TSPY21P-201ENST00000433481 731 ntBASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 KSR1P1-201ENST00000446298 240 ntBASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PPP4R4Q6NUP7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 AP003071.4-201ENST00000562276 1284 ntBASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 MTMR9LP-203ENST00000426597 1545 ntBASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
PPP4R4Q6NUP7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PPP4R4Q6NUP7 REXO1L9P-201ENST00000604264 2108 ntBASIC17.39■□□□□ 0.38
PPP4R4Q6NUP7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 FLJ13224-201ENST00000313737 1514 ntBASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 AC131212.4-201ENST00000623606 975 ntBASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 MYC-208ENST00000641036 567 ntBASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP4R4Q6NUP7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP4R4Q6NUP7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms