Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF43Q68DV7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF43Q68DV7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RNF43Q68DV7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF43Q68DV7 AL136038.4-201ENST00000603606 1261 ntBASIC19.01■□□□□ 0.63
RNF43Q68DV7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF43Q68DV7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF43Q68DV7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF43Q68DV7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
RNF43Q68DV7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF43Q68DV7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RNF43Q68DV7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RNF43Q68DV7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF43Q68DV7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RNF43Q68DV7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF43Q68DV7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF43Q68DV7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF43Q68DV7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF43Q68DV7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF43Q68DV7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19■□□□□ 0.63
RNF43Q68DV7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19■□□□□ 0.63
RNF43Q68DV7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19■□□□□ 0.63
RNF43Q68DV7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF43Q68DV7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19■□□□□ 0.63
RNF43Q68DV7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
RNF43Q68DV7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF43Q68DV7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
RNF43Q68DV7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RNF43Q68DV7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
RNF43Q68DV7 AP000593.1-201ENST00000393668 712 ntBASIC19■□□□□ 0.63
RNF43Q68DV7 PVRIG2P-201ENST00000435460 978 ntBASIC19■□□□□ 0.63
RNF43Q68DV7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RNF43Q68DV7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19■□□□□ 0.63
RNF43Q68DV7 AC111152.3-201ENST00000569699 673 ntBASIC19■□□□□ 0.63
RNF43Q68DV7 AC092119.3-201ENST00000612618 583 ntBASIC19■□□□□ 0.63
RNF43Q68DV7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF43Q68DV7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF43Q68DV7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RNF43Q68DV7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF43Q68DV7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF43Q68DV7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19■□□□□ 0.63
RNF43Q68DV7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19■□□□□ 0.63
RNF43Q68DV7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF43Q68DV7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF43Q68DV7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19■□□□□ 0.63
RNF43Q68DV7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF43Q68DV7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RNF43Q68DV7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RNF43Q68DV7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RNF43Q68DV7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF43Q68DV7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RNF43Q68DV7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
RNF43Q68DV7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF43Q68DV7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RNF43Q68DV7 AL645929.1-201ENST00000420084 975 ntBASIC18.99■□□□□ 0.63
RNF43Q68DV7 AL845331.1-201ENST00000424978 1190 ntBASIC18.99■□□□□ 0.63
RNF43Q68DV7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF43Q68DV7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
RNF43Q68DV7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RNF43Q68DV7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF43Q68DV7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 PRORSD1P-202ENST00000563365 2154 ntBASIC18.99■□□□□ 0.63
RNF43Q68DV7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF43Q68DV7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF43Q68DV7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF43Q68DV7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF43Q68DV7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RNF43Q68DV7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF43Q68DV7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF43Q68DV7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF43Q68DV7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF43Q68DV7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF43Q68DV7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF43Q68DV7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF43Q68DV7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RNF43Q68DV7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF43Q68DV7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF43Q68DV7 AP000347.1-202ENST00000435868 847 ntBASIC18.98■□□□□ 0.63
RNF43Q68DV7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF43Q68DV7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF43Q68DV7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF43Q68DV7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF43Q68DV7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RNF43Q68DV7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF43Q68DV7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms