Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 AL499627.1-201ENST00000569373 2188 ntBASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TTC39BQ5VTQ0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 AC024563.2-201ENST00000603282 481 ntBASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TTC39BQ5VTQ0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 KRT18P48-201ENST00000434763 852 ntBASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.87■□□□□ 0.61
TTC39BQ5VTQ0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms