Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.73■■□□□ 1.23
RC3H1Q5TC82 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
RC3H1Q5TC82 AC002310.6-201ENST00000624451 1377 ntBASIC22.73■■□□□ 1.23
RC3H1Q5TC82 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RC3H1Q5TC82 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
RC3H1Q5TC82 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RC3H1Q5TC82 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RC3H1Q5TC82 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RC3H1Q5TC82 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RC3H1Q5TC82 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 AC004706.3-202ENST00000621574 984 ntBASIC22.72■■□□□ 1.23
RC3H1Q5TC82 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RC3H1Q5TC82 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 METTL26-205ENST00000397666 726 ntTSL 2 BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 AC254562.1-201ENST00000417586 456 ntBASIC22.71■■□□□ 1.23
RC3H1Q5TC82 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.71■■□□□ 1.23
RC3H1Q5TC82 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
RC3H1Q5TC82 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC22.7■■□□□ 1.22
RC3H1Q5TC82 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC22.7■■□□□ 1.22
RC3H1Q5TC82 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC22.7■■□□□ 1.22
RC3H1Q5TC82 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC22.7■■□□□ 1.22
RC3H1Q5TC82 AL596442.2-201ENST00000610240 980 ntBASIC22.7■■□□□ 1.22
RC3H1Q5TC82 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.7■■□□□ 1.22
RC3H1Q5TC82 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RC3H1Q5TC82 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.7■■□□□ 1.22
RC3H1Q5TC82 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 KRT8P47-201ENST00000604727 1398 ntBASIC22.69■■□□□ 1.22
RC3H1Q5TC82 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 METTL21AP1-201ENST00000438852 635 ntBASIC22.69■■□□□ 1.22
RC3H1Q5TC82 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 CFL1-202ENST00000524553 860 ntTSL 2 BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 AC092865.6-201ENST00000642101 219 ntBASIC22.69■■□□□ 1.22
RC3H1Q5TC82 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RC3H1Q5TC82 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.68■■□□□ 1.22
RC3H1Q5TC82 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
RC3H1Q5TC82 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RC3H1Q5TC82 GMCL1P1-201ENST00000463439 1581 ntBASIC22.68■■□□□ 1.22
RC3H1Q5TC82 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.68■■□□□ 1.22
RC3H1Q5TC82 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RC3H1Q5TC82 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.68■■□□□ 1.22
RC3H1Q5TC82 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RC3H1Q5TC82 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RC3H1Q5TC82 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RC3H1Q5TC82 COX5BP2-201ENST00000392354 334 ntBASIC22.68■■□□□ 1.22
RC3H1Q5TC82 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC22.68■■□□□ 1.22
RC3H1Q5TC82 CRYGEP-201ENST00000412192 528 ntBASIC22.68■■□□□ 1.22
RC3H1Q5TC82 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC22.68■■□□□ 1.22
RC3H1Q5TC82 PON3-205ENST00000451904 1053 ntTSL 3 BASIC22.68■■□□□ 1.22
RC3H1Q5TC82 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC22.68■■□□□ 1.22
RC3H1Q5TC82 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms