Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 AC022211.2-201ENST00000585075 2527 ntBASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 LINC00602-201ENST00000629776 2065 ntBASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 AL353807.1-201ENST00000427475 662 ntBASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 AC104771.1-201ENST00000603335 964 ntBASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 CR392000.1-201ENST00000624770 1228 ntBASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00242Q5T6M2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 AL355312.1-201ENST00000407115 2176 ntBASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC00242Q5T6M2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms