Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM35AQ53FP2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 AP003733.1-201ENST00000491725 852 ntBASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 LINC00602-201ENST00000629776 2065 ntBASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35AQ53FP2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 IGHGP-201ENST00000390555 1178 ntBASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 KRT18P65-201ENST00000439811 1286 ntBASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 AL049597.2-201ENST00000565575 961 ntBASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35AQ53FP2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 AP000997.3-201ENST00000623333 2250 ntBASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM35AQ53FP2 KRT18P55-202ENST00000578578 1546 ntBASIC17.21■□□□□ 0.34
TMEM35AQ53FP2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms