Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 KRT18P38-201ENST00000449496 1282 ntBASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 AC063952.2-201ENST00000498792 1227 ntBASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 AC140113.3-201ENST00000605663 199 ntBASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 KRT8P50-201ENST00000562022 1438 ntBASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 AC134043.2-201ENST00000624206 2238 ntBASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 AC099343.3-201ENST00000605834 2503 ntBASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 AC084018.2-201ENST00000613093 2607 ntBASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 SIRPAP1-201ENST00000448467 1770 ntBASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 AL049597.2-201ENST00000565575 961 ntBASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KHDC1Q4VXA5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 AP000523.1-201ENST00000398242 1049 ntBASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 MIR1224-201ENST00000408193 85 ntBASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 SPDYE15P-201ENST00000424157 909 ntBASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 AC022616.7-201ENST00000525383 220 ntBASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 AC010331.1-201ENST00000611423 582 ntBASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KHDC1Q4VXA5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms