Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 HLA-A-209ENST00000638375 975 ntBASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC6LQ2NKX8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.21■□□□□ 0.66
ERCC6LQ2NKX8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
ERCC6LQ2NKX8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 AL137784.2-201ENST00000607332 1000 ntBASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ERCC6LQ2NKX8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 KRT18P41-201ENST00000518924 1277 ntBASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ERCC6LQ2NKX8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC6LQ2NKX8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC6LQ2NKX8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms