Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS3P61009 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS3P61009 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.78□□□□□ -0.04
SPCS3P61009 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SPCS3P61009 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS3P61009 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SPCS3P61009 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.78□□□□□ -0.04
SPCS3P61009 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.78□□□□□ -0.04
SPCS3P61009 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS3P61009 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS3P61009 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS3P61009 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.78□□□□□ -0.04
SPCS3P61009 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.78□□□□□ -0.04
SPCS3P61009 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.78□□□□□ -0.04
SPCS3P61009 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.78□□□□□ -0.04
SPCS3P61009 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.78□□□□□ -0.04
SPCS3P61009 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SPCS3P61009 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.78□□□□□ -0.04
SPCS3P61009 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.78□□□□□ -0.04
SPCS3P61009 CR392000.1-201ENST00000624770 1228 ntBASIC14.78□□□□□ -0.04
SPCS3P61009 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS3P61009 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS3P61009 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS3P61009 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS3P61009 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.78□□□□□ -0.04
SPCS3P61009 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.78□□□□□ -0.04
SPCS3P61009 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS3P61009 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS3P61009 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS3P61009 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SPCS3P61009 FER1L4-210ENST00000615531 5998 ntBASIC14.78□□□□□ -0.04
SPCS3P61009 AL096828.2-201ENST00000567259 1965 ntBASIC14.78□□□□□ -0.04
SPCS3P61009 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.78□□□□□ -0.04
SPCS3P61009 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.78□□□□□ -0.04
SPCS3P61009 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.78□□□□□ -0.04
SPCS3P61009 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.78□□□□□ -0.04
SPCS3P61009 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.78□□□□□ -0.04
SPCS3P61009 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS3P61009 PCDHA12-202ENST00000613593 2588 ntBASIC14.78□□□□□ -0.04
SPCS3P61009 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPCS3P61009 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS3P61009 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS3P61009 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS3P61009 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS3P61009 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS3P61009 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS3P61009 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SPCS3P61009 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS3P61009 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS3P61009 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS3P61009 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
SPCS3P61009 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS3P61009 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS3P61009 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SPCS3P61009 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SPCS3P61009 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
SPCS3P61009 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SPCS3P61009 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.77□□□□□ -0.05
SPCS3P61009 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.77□□□□□ -0.05
SPCS3P61009 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.77□□□□□ -0.05
SPCS3P61009 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.77□□□□□ -0.05
SPCS3P61009 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.77□□□□□ -0.05
SPCS3P61009 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.77□□□□□ -0.05
SPCS3P61009 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.77□□□□□ -0.05
SPCS3P61009 AC034236.2-201ENST00000606662 1610 ntBASIC14.77□□□□□ -0.05
SPCS3P61009 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SPCS3P61009 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.77□□□□□ -0.05
SPCS3P61009 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SPCS3P61009 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS3P61009 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS3P61009 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.76□□□□□ -0.05
SPCS3P61009 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.76□□□□□ -0.05
SPCS3P61009 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS3P61009 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS3P61009 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS3P61009 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS3P61009 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS3P61009 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS3P61009 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS3P61009 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS3P61009 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS3P61009 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS3P61009 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SPCS3P61009 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms