Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MCCD1P59942 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.39■□□□□ 0.69
MCCD1P59942 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.39■□□□□ 0.69
MCCD1P59942 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MCCD1P59942 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MCCD1P59942 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
MCCD1P59942 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.39■□□□□ 0.69
MCCD1P59942 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.39■□□□□ 0.69
MCCD1P59942 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.39■□□□□ 0.69
MCCD1P59942 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MCCD1P59942 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MCCD1P59942 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.39■□□□□ 0.69
MCCD1P59942 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MCCD1P59942 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
MCCD1P59942 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MCCD1P59942 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.39■□□□□ 0.69
MCCD1P59942 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
MCCD1P59942 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
MCCD1P59942 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
MCCD1P59942 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MCCD1P59942 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.38■□□□□ 0.69
MCCD1P59942 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.38■□□□□ 0.69
MCCD1P59942 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.38■□□□□ 0.69
MCCD1P59942 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.38■□□□□ 0.69
MCCD1P59942 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.38■□□□□ 0.69
MCCD1P59942 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.38■□□□□ 0.69
MCCD1P59942 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.38■□□□□ 0.69
MCCD1P59942 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 AC090616.6-201ENST00000582640 721 ntBASIC19.38■□□□□ 0.69
MCCD1P59942 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.38■□□□□ 0.69
MCCD1P59942 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 AC016734.2-201ENST00000624325 1377 ntBASIC19.38■□□□□ 0.69
MCCD1P59942 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MCCD1P59942 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MCCD1P59942 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MCCD1P59942 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
MCCD1P59942 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.37■□□□□ 0.69
MCCD1P59942 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MCCD1P59942 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.37■□□□□ 0.69
MCCD1P59942 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.37■□□□□ 0.69
MCCD1P59942 AC005104.2-201ENST00000427818 678 ntBASIC19.37■□□□□ 0.69
MCCD1P59942 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MCCD1P59942 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MCCD1P59942 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.37■□□□□ 0.69
MCCD1P59942 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.37■□□□□ 0.69
MCCD1P59942 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MCCD1P59942 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MCCD1P59942 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MCCD1P59942 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.37■□□□□ 0.69
MCCD1P59942 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MCCD1P59942 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.36■□□□□ 0.69
MCCD1P59942 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MCCD1P59942 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.36■□□□□ 0.69
MCCD1P59942 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.36■□□□□ 0.69
MCCD1P59942 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.36■□□□□ 0.69
MCCD1P59942 AC116407.2-201ENST00000613639 860 ntBASIC19.36■□□□□ 0.69
MCCD1P59942 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.36■□□□□ 0.69
MCCD1P59942 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.36■□□□□ 0.69
MCCD1P59942 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.36■□□□□ 0.69
MCCD1P59942 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MCCD1P59942 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MCCD1P59942 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
MCCD1P59942 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.35■□□□□ 0.69
MCCD1P59942 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MCCD1P59942 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.35■□□□□ 0.69
MCCD1P59942 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.35■□□□□ 0.69
MCCD1P59942 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MCCD1P59942 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MCCD1P59942 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MCCD1P59942 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms