Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN6P56747 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN6P56747 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN6P56747 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CLDN6P56747 MIR149-201ENST00000384879 89 ntBASIC17.36■□□□□ 0.37
CLDN6P56747 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN6P56747 MTCL1P1-201ENST00000446207 792 ntBASIC17.36■□□□□ 0.37
CLDN6P56747 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN6P56747 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN6P56747 AL138831.2-201ENST00000606564 490 ntBASIC17.36■□□□□ 0.37
CLDN6P56747 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN6P56747 Z83851.2-201ENST00000609564 659 ntBASIC17.36■□□□□ 0.37
CLDN6P56747 FAM197Y3-203ENST00000618346 717 ntBASIC17.36■□□□□ 0.37
CLDN6P56747 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN6P56747 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLDN6P56747 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN6P56747 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN6P56747 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CLDN6P56747 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CLDN6P56747 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLDN6P56747 AL032819.2-201ENST00000624543 2162 ntBASIC17.36■□□□□ 0.37
CLDN6P56747 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN6P56747 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CLDN6P56747 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN6P56747 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN6P56747 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 AL024508.2-201ENST00000607749 1894 ntBASIC17.35■□□□□ 0.37
CLDN6P56747 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLDN6P56747 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN6P56747 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN6P56747 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN6P56747 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 AC009533.2-201ENST00000543664 586 ntBASIC17.35■□□□□ 0.37
CLDN6P56747 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN6P56747 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN6P56747 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.35■□□□□ 0.37
CLDN6P56747 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN6P56747 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLDN6P56747 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN6P56747 AC009102.3-201ENST00000623118 1491 ntBASIC17.35■□□□□ 0.37
CLDN6P56747 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN6P56747 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN6P56747 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLDN6P56747 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN6P56747 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN6P56747 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN6P56747 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
CLDN6P56747 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN6P56747 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN6P56747 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN6P56747 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN6P56747 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN6P56747 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLDN6P56747 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN6P56747 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN6P56747 AC023274.1-201ENST00000418278 595 ntBASIC17.34■□□□□ 0.37
CLDN6P56747 ABCD1P5-201ENST00000445663 754 ntBASIC17.34■□□□□ 0.37
CLDN6P56747 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLDN6P56747 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN6P56747 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN6P56747 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN6P56747 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN6P56747 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CLDN6P56747 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN6P56747 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.34■□□□□ 0.37
CLDN6P56747 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN6P56747 AC011467.2-201ENST00000598425 242 ntBASIC17.34■□□□□ 0.37
CLDN6P56747 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLDN6P56747 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN6P56747 AC022898.2-201ENST00000616822 1312 ntBASIC17.34■□□□□ 0.37
CLDN6P56747 AL356309.3-201ENST00000624132 1934 ntBASIC17.34■□□□□ 0.37
CLDN6P56747 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN6P56747 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN6P56747 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN6P56747 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN6P56747 SDHAP2-201ENST00000455183 2001 ntBASIC17.33■□□□□ 0.37
CLDN6P56747 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN6P56747 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CLDN6P56747 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.33■□□□□ 0.37
CLDN6P56747 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CLDN6P56747 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN6P56747 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN6P56747 AC125634.1-201ENST00000438758 1403 ntBASIC17.33■□□□□ 0.36
CLDN6P56747 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CLDN6P56747 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN6P56747 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms