Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.78■□□□□ 0.28
PER3P56645 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.78■□□□□ 0.28
PER3P56645 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.78■□□□□ 0.28
PER3P56645 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
PER3P56645 MIR4674-201ENST00000582457 87 ntBASIC16.78■□□□□ 0.28
PER3P56645 AC024243.1-201ENST00000609234 778 ntBASIC16.78■□□□□ 0.28
PER3P56645 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.78■□□□□ 0.28
PER3P56645 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.78■□□□□ 0.28
PER3P56645 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.78■□□□□ 0.28
PER3P56645 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.78■□□□□ 0.28
PER3P56645 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PER3P56645 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PER3P56645 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PER3P56645 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PER3P56645 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PER3P56645 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PER3P56645 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.77■□□□□ 0.28
PER3P56645 AL162741.1-201ENST00000565563 1558 ntBASIC16.77■□□□□ 0.28
PER3P56645 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PER3P56645 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PER3P56645 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PER3P56645 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PER3P56645 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PER3P56645 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PER3P56645 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.77■□□□□ 0.28
PER3P56645 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PER3P56645 EMBP1-201ENST00000458200 901 ntBASIC16.77■□□□□ 0.28
PER3P56645 AP000867.3-201ENST00000524675 377 ntBASIC16.77■□□□□ 0.28
PER3P56645 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PER3P56645 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.77■□□□□ 0.28
PER3P56645 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.77■□□□□ 0.28
PER3P56645 AC012615.1-201ENST00000565797 1299 ntBASIC16.77■□□□□ 0.28
PER3P56645 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PER3P56645 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.77■□□□□ 0.28
PER3P56645 AC004263.2-201ENST00000617183 678 ntBASIC16.77■□□□□ 0.28
PER3P56645 AL031008.1-201ENST00000619963 541 ntBASIC16.77■□□□□ 0.28
PER3P56645 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
PER3P56645 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PER3P56645 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.77■□□□□ 0.27
PER3P56645 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PER3P56645 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PER3P56645 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PER3P56645 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
PER3P56645 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PER3P56645 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PER3P56645 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PER3P56645 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PER3P56645 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.76■□□□□ 0.27
PER3P56645 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
PER3P56645 CROCCP3-202ENST00000420820 1947 ntBASIC16.76■□□□□ 0.27
PER3P56645 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PER3P56645 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.76■□□□□ 0.27
PER3P56645 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PER3P56645 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PER3P56645 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PER3P56645 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PER3P56645 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.76■□□□□ 0.27
PER3P56645 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.76■□□□□ 0.27
PER3P56645 GPAT2P1-201ENST00000444924 1672 ntBASIC16.76■□□□□ 0.27
PER3P56645 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.76■□□□□ 0.27
PER3P56645 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PER3P56645 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PER3P56645 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PER3P56645 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.76■□□□□ 0.27
PER3P56645 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PER3P56645 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PER3P56645 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PER3P56645 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PER3P56645 LINC00265-3P-201ENST00000447588 903 ntBASIC16.76■□□□□ 0.27
PER3P56645 AC009078.2-202ENST00000463353 338 ntBASIC16.76■□□□□ 0.27
PER3P56645 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PER3P56645 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PER3P56645 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PER3P56645 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PER3P56645 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PER3P56645 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.76■□□□□ 0.27
PER3P56645 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.76■□□□□ 0.27
PER3P56645 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PER3P56645 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PER3P56645 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
PER3P56645 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.75■□□□□ 0.27
PER3P56645 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.75■□□□□ 0.27
PER3P56645 TSPY22P-201ENST00000427496 604 ntBASIC16.75■□□□□ 0.27
PER3P56645 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PER3P56645 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms