Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.28□□□□□ -0.28
APOC4P55056 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
APOC4P55056 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
APOC4P55056 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
APOC4P55056 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
APOC4P55056 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
APOC4P55056 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC4P55056 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOC4P55056 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOC4P55056 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
APOC4P55056 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.27□□□□□ -0.28
APOC4P55056 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.27□□□□□ -0.28
APOC4P55056 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
APOC4P55056 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
APOC4P55056 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
APOC4P55056 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
APOC4P55056 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOC4P55056 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
APOC4P55056 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.27□□□□□ -0.28
APOC4P55056 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 AC004870.1-201ENST00000315132 882 ntBASIC13.27□□□□□ -0.29
APOC4P55056 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.27□□□□□ -0.29
APOC4P55056 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.27□□□□□ -0.29
APOC4P55056 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
APOC4P55056 AC091304.2-201ENST00000564639 760 ntBASIC13.27□□□□□ -0.29
APOC4P55056 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.27□□□□□ -0.29
APOC4P55056 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.27□□□□□ -0.29
APOC4P55056 AC099336.1-202ENST00000602961 463 ntBASIC13.27□□□□□ -0.29
APOC4P55056 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.27□□□□□ -0.29
APOC4P55056 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
APOC4P55056 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.27□□□□□ -0.29
APOC4P55056 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.27□□□□□ -0.29
APOC4P55056 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.27□□□□□ -0.29
APOC4P55056 LINC00167-201ENST00000530583 1419 ntBASIC13.27□□□□□ -0.29
APOC4P55056 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
APOC4P55056 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.27□□□□□ -0.29
APOC4P55056 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC4P55056 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.26□□□□□ -0.29
APOC4P55056 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
APOC4P55056 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.26□□□□□ -0.29
APOC4P55056 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.26□□□□□ -0.29
APOC4P55056 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 KRT18P65-201ENST00000439811 1286 ntBASIC13.26□□□□□ -0.29
APOC4P55056 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.26□□□□□ -0.29
APOC4P55056 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.26□□□□□ -0.29
APOC4P55056 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.26□□□□□ -0.29
APOC4P55056 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.26□□□□□ -0.29
APOC4P55056 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
APOC4P55056 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.26□□□□□ -0.29
APOC4P55056 AC012313.10-201ENST00000623509 926 ntBASIC13.26□□□□□ -0.29
APOC4P55056 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC4P55056 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.26□□□□□ -0.29
APOC4P55056 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
APOC4P55056 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOC4P55056 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.25□□□□□ -0.29
APOC4P55056 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms