Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.42■□□□□ 0.38
EPHA4P54764 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.42■□□□□ 0.38
EPHA4P54764 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.42■□□□□ 0.38
EPHA4P54764 AL160237.2-201ENST00000556165 472 ntBASIC17.42■□□□□ 0.38
EPHA4P54764 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.42■□□□□ 0.38
EPHA4P54764 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.42■□□□□ 0.38
EPHA4P54764 AC104692.2-201ENST00000603054 253 ntBASIC17.42■□□□□ 0.38
EPHA4P54764 AL121912.1-201ENST00000603683 238 ntBASIC17.42■□□□□ 0.38
EPHA4P54764 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA4P54764 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA4P54764 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA4P54764 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.42■□□□□ 0.38
EPHA4P54764 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA4P54764 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA4P54764 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA4P54764 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA4P54764 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
EPHA4P54764 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA4P54764 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA4P54764 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
EPHA4P54764 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.41■□□□□ 0.38
EPHA4P54764 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
EPHA4P54764 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
EPHA4P54764 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.41■□□□□ 0.38
EPHA4P54764 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 AC005082.1-201ENST00000413042 2259 ntBASIC17.41■□□□□ 0.38
EPHA4P54764 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
EPHA4P54764 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.41■□□□□ 0.38
EPHA4P54764 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.41■□□□□ 0.38
EPHA4P54764 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
EPHA4P54764 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.41■□□□□ 0.38
EPHA4P54764 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
EPHA4P54764 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 MIR5100-201ENST00000579544 119 ntBASIC17.41■□□□□ 0.38
EPHA4P54764 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.41■□□□□ 0.38
EPHA4P54764 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.41■□□□□ 0.38
EPHA4P54764 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.41■□□□□ 0.38
EPHA4P54764 AL591684.3-201ENST00000605187 298 ntBASIC17.41■□□□□ 0.38
EPHA4P54764 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.41■□□□□ 0.38
EPHA4P54764 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.41■□□□□ 0.38
EPHA4P54764 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.41■□□□□ 0.38
EPHA4P54764 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHA4P54764 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
EPHA4P54764 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA4P54764 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.4■□□□□ 0.38
EPHA4P54764 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA4P54764 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EPHA4P54764 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA4P54764 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA4P54764 AC073592.3-201ENST00000625118 1834 ntBASIC17.4■□□□□ 0.38
EPHA4P54764 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.4■□□□□ 0.38
EPHA4P54764 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA4P54764 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.4■□□□□ 0.38
EPHA4P54764 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA4P54764 AKR1C7P-201ENST00000305623 895 ntBASIC17.4■□□□□ 0.38
EPHA4P54764 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
EPHA4P54764 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.4■□□□□ 0.38
EPHA4P54764 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.4■□□□□ 0.38
EPHA4P54764 AC079781.3-201ENST00000449110 356 ntBASIC17.4■□□□□ 0.38
EPHA4P54764 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EPHA4P54764 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.4■□□□□ 0.38
EPHA4P54764 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.4■□□□□ 0.38
EPHA4P54764 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.4■□□□□ 0.38
EPHA4P54764 AL138831.2-201ENST00000606564 490 ntBASIC17.4■□□□□ 0.38
EPHA4P54764 CROCCP3-202ENST00000420820 1947 ntBASIC17.4■□□□□ 0.38
EPHA4P54764 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA4P54764 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA4P54764 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
EPHA4P54764 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
EPHA4P54764 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
EPHA4P54764 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.4■□□□□ 0.38
EPHA4P54764 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA4P54764 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA4P54764 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPHA4P54764 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.4■□□□□ 0.38
EPHA4P54764 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.4■□□□□ 0.38
EPHA4P54764 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.4■□□□□ 0.38
EPHA4P54764 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
EPHA4P54764 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
EPHA4P54764 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
EPHA4P54764 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
EPHA4P54764 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.38
EPHA4P54764 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA4P54764 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA4P54764 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA4P54764 TP73-AS1-210ENST00000637775 1455 ntBASIC17.39■□□□□ 0.37
EPHA4P54764 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms