Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR1P51861 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.84■□□□□ 0.77
CDR1P51861 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.84■□□□□ 0.77
CDR1P51861 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR1P51861 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CDR1P51861 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR1P51861 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
CDR1P51861 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CDR1P51861 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR1P51861 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR1P51861 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR1P51861 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CDR1P51861 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR1P51861 HOMER2P1-201ENST00000455653 964 ntBASIC19.84■□□□□ 0.77
CDR1P51861 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.84■□□□□ 0.77
CDR1P51861 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR1P51861 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.84■□□□□ 0.77
CDR1P51861 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.84■□□□□ 0.77
CDR1P51861 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.84■□□□□ 0.77
CDR1P51861 AL157888.1-201ENST00000631930 593 ntBASIC19.84■□□□□ 0.77
CDR1P51861 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.84■□□□□ 0.77
CDR1P51861 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CDR1P51861 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR1P51861 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR1P51861 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR1P51861 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR1P51861 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDR1P51861 LINC01311-201ENST00000565162 1445 ntBASIC19.84■□□□□ 0.77
CDR1P51861 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR1P51861 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDR1P51861 AL133373.2-201ENST00000623187 2828 ntBASIC19.84■□□□□ 0.77
CDR1P51861 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDR1P51861 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDR1P51861 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDR1P51861 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.83■□□□□ 0.77
CDR1P51861 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDR1P51861 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDR1P51861 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDR1P51861 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDR1P51861 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDR1P51861 AP000523.1-201ENST00000398242 1049 ntBASIC19.83■□□□□ 0.77
CDR1P51861 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDR1P51861 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.83■□□□□ 0.77
CDR1P51861 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.83■□□□□ 0.77
CDR1P51861 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDR1P51861 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.83■□□□□ 0.76
CDR1P51861 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDR1P51861 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.83■□□□□ 0.76
CDR1P51861 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.83■□□□□ 0.76
CDR1P51861 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDR1P51861 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDR1P51861 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CDR1P51861 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR1P51861 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.82■□□□□ 0.76
CDR1P51861 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR1P51861 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR1P51861 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CDR1P51861 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.82■□□□□ 0.76
CDR1P51861 AC005332.1-201ENST00000577698 1310 ntBASIC19.82■□□□□ 0.76
CDR1P51861 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
CDR1P51861 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDR1P51861 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDR1P51861 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.82■□□□□ 0.76
CDR1P51861 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.82■□□□□ 0.76
CDR1P51861 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CDR1P51861 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR1P51861 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR1P51861 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDR1P51861 KRT8P32-201ENST00000512863 1461 ntBASIC19.82■□□□□ 0.76
CDR1P51861 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CDR1P51861 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.82■□□□□ 0.76
CDR1P51861 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR1P51861 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDR1P51861 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDR1P51861 SPDYE13P-201ENST00000445314 798 ntBASIC19.82■□□□□ 0.76
CDR1P51861 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
CDR1P51861 SEC1P-202ENST00000473944 940 ntBASIC19.82■□□□□ 0.76
CDR1P51861 VENTXP5-201ENST00000523979 775 ntBASIC19.82■□□□□ 0.76
CDR1P51861 NEK4P2-201ENST00000580004 1012 ntBASIC19.82■□□□□ 0.76
CDR1P51861 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CDR1P51861 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.82■□□□□ 0.76
CDR1P51861 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.82■□□□□ 0.76
CDR1P51861 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.82■□□□□ 0.76
CDR1P51861 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR1P51861 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.82■□□□□ 0.76
CDR1P51861 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR1P51861 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDR1P51861 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR1P51861 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR1P51861 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.81■□□□□ 0.76
CDR1P51861 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.81■□□□□ 0.76
CDR1P51861 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CDR1P51861 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR1P51861 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR1P51861 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.81■□□□□ 0.76
CDR1P51861 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CDR1P51861 AL499627.1-201ENST00000569373 2188 ntBASIC19.81■□□□□ 0.76
CDR1P51861 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDR1P51861 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.81■□□□□ 0.76
CDR1P51861 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms