Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLCN3P51790 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.86■□□□□ 0.77
CLCN3P51790 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN3P51790 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN3P51790 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN3P51790 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.86■□□□□ 0.77
CLCN3P51790 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.86■□□□□ 0.77
CLCN3P51790 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN3P51790 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN3P51790 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.86■□□□□ 0.77
CLCN3P51790 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLCN3P51790 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN3P51790 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN3P51790 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CLCN3P51790 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN3P51790 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
CLCN3P51790 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN3P51790 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.86■□□□□ 0.77
CLCN3P51790 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.86■□□□□ 0.77
CLCN3P51790 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN3P51790 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLCN3P51790 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.86■□□□□ 0.77
CLCN3P51790 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.86■□□□□ 0.77
CLCN3P51790 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.86■□□□□ 0.77
CLCN3P51790 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN3P51790 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLCN3P51790 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
CLCN3P51790 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.85■□□□□ 0.77
CLCN3P51790 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN3P51790 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
CLCN3P51790 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLCN3P51790 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN3P51790 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CLCN3P51790 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.85■□□□□ 0.77
CLCN3P51790 MRPL3P1-201ENST00000400109 1033 ntBASIC19.85■□□□□ 0.77
CLCN3P51790 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLCN3P51790 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 AC132008.2-207ENST00000454517 770 ntBASIC19.85■□□□□ 0.77
CLCN3P51790 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.85■□□□□ 0.77
CLCN3P51790 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.85■□□□□ 0.77
CLCN3P51790 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.85■□□□□ 0.77
CLCN3P51790 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.85■□□□□ 0.77
CLCN3P51790 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.85■□□□□ 0.77
CLCN3P51790 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.85■□□□□ 0.77
CLCN3P51790 TP73-AS1-207ENST00000624167 988 ntBASIC19.85■□□□□ 0.77
CLCN3P51790 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CLCN3P51790 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.85■□□□□ 0.77
CLCN3P51790 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLCN3P51790 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.85■□□□□ 0.77
CLCN3P51790 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CLCN3P51790 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN3P51790 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN3P51790 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN3P51790 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN3P51790 AC093010.1-201ENST00000473625 1624 ntBASIC19.84■□□□□ 0.77
CLCN3P51790 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN3P51790 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN3P51790 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.84■□□□□ 0.77
CLCN3P51790 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN3P51790 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CLCN3P51790 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.84■□□□□ 0.77
CLCN3P51790 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN3P51790 AC009533.2-201ENST00000543664 586 ntBASIC19.84■□□□□ 0.77
CLCN3P51790 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.84■□□□□ 0.77
CLCN3P51790 SLC25A6P4-201ENST00000586535 553 ntBASIC19.84■□□□□ 0.77
CLCN3P51790 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.84■□□□□ 0.77
CLCN3P51790 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.84■□□□□ 0.77
CLCN3P51790 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.84■□□□□ 0.77
CLCN3P51790 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CLCN3P51790 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN3P51790 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CLCN3P51790 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN3P51790 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.83■□□□□ 0.77
CLCN3P51790 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.83■□□□□ 0.77
CLCN3P51790 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CLCN3P51790 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.83■□□□□ 0.77
CLCN3P51790 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.83■□□□□ 0.77
CLCN3P51790 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN3P51790 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
CLCN3P51790 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.83■□□□□ 0.77
CLCN3P51790 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.83■□□□□ 0.77
CLCN3P51790 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.83■□□□□ 0.77
CLCN3P51790 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN3P51790 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms