Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.6■□□□□ 0.25
SSR4P51571 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 AC091607.1-201ENST00000490318 1060 ntBASIC16.6■□□□□ 0.25
SSR4P51571 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.6■□□□□ 0.25
SSR4P51571 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.6■□□□□ 0.25
SSR4P51571 AC091304.2-201ENST00000564639 760 ntBASIC16.6■□□□□ 0.25
SSR4P51571 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.6■□□□□ 0.25
SSR4P51571 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.6■□□□□ 0.25
SSR4P51571 AP005901.3-202ENST00000581653 237 ntBASIC16.6■□□□□ 0.25
SSR4P51571 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.6■□□□□ 0.25
SSR4P51571 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SSR4P51571 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
SSR4P51571 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR4P51571 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SSR4P51571 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 AL138781.2-201ENST00000617896 1843 ntBASIC16.59■□□□□ 0.25
SSR4P51571 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SSR4P51571 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SSR4P51571 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 TPM4P1-201ENST00000436100 807 ntBASIC16.59■□□□□ 0.25
SSR4P51571 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.59■□□□□ 0.25
SSR4P51571 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.59■□□□□ 0.25
SSR4P51571 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.59■□□□□ 0.25
SSR4P51571 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SSR4P51571 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SSR4P51571 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 HTR7P1-202ENST00000624664 4411 ntBASIC16.59■□□□□ 0.25
SSR4P51571 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.59■□□□□ 0.25
SSR4P51571 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.59■□□□□ 0.25
SSR4P51571 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.59■□□□□ 0.25
SSR4P51571 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR4P51571 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SSR4P51571 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.58■□□□□ 0.25
SSR4P51571 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SSR4P51571 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.58■□□□□ 0.25
SSR4P51571 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSR4P51571 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SSR4P51571 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSR4P51571 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSR4P51571 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSR4P51571 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSR4P51571 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR4P51571 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR4P51571 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
SSR4P51571 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.58■□□□□ 0.24
SSR4P51571 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.58■□□□□ 0.24
SSR4P51571 TSPY19P-201ENST00000418461 509 ntBASIC16.58■□□□□ 0.24
SSR4P51571 TSPY18P-201ENST00000441642 509 ntBASIC16.58■□□□□ 0.24
SSR4P51571 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.58■□□□□ 0.24
SSR4P51571 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.58■□□□□ 0.24
SSR4P51571 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.58■□□□□ 0.24
SSR4P51571 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.58■□□□□ 0.24
SSR4P51571 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.58■□□□□ 0.24
SSR4P51571 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSR4P51571 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR4P51571 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.58■□□□□ 0.24
SSR4P51571 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR4P51571 PHGDH-209ENST00000641074 1780 ntBASIC16.58■□□□□ 0.24
SSR4P51571 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
SSR4P51571 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.58■□□□□ 0.24
SSR4P51571 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR4P51571 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
SSR4P51571 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.58■□□□□ 0.24
SSR4P51571 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SSR4P51571 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms