Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PSEN1P49768 ANO7L1-203ENST00000602586 1720 ntBASIC19.25■□□□□ 0.67
PSEN1P49768 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PSEN1P49768 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.25■□□□□ 0.67
PSEN1P49768 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PSEN1P49768 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
PSEN1P49768 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PSEN1P49768 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.25■□□□□ 0.67
PSEN1P49768 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.25■□□□□ 0.67
PSEN1P49768 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.25■□□□□ 0.67
PSEN1P49768 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PSEN1P49768 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PSEN1P49768 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PSEN1P49768 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PSEN1P49768 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PSEN1P49768 AC009102.3-201ENST00000623118 1491 ntBASIC19.24■□□□□ 0.67
PSEN1P49768 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.24■□□□□ 0.67
PSEN1P49768 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PSEN1P49768 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PSEN1P49768 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PSEN1P49768 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PSEN1P49768 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PSEN1P49768 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.24■□□□□ 0.67
PSEN1P49768 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.24■□□□□ 0.67
PSEN1P49768 AC008687.5-201ENST00000593746 558 ntBASIC19.24■□□□□ 0.67
PSEN1P49768 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.24■□□□□ 0.67
PSEN1P49768 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PSEN1P49768 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PSEN1P49768 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PSEN1P49768 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.24■□□□□ 0.67
PSEN1P49768 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
PSEN1P49768 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PSEN1P49768 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PSEN1P49768 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.23■□□□□ 0.67
PSEN1P49768 AL162741.1-201ENST00000565563 1558 ntBASIC19.23■□□□□ 0.67
PSEN1P49768 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PSEN1P49768 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.23■□□□□ 0.67
PSEN1P49768 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PSEN1P49768 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PSEN1P49768 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.23■□□□□ 0.67
PSEN1P49768 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.23■□□□□ 0.67
PSEN1P49768 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PSEN1P49768 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.23■□□□□ 0.67
PSEN1P49768 UPK3BP1-201ENST00000428678 509 ntBASIC19.23■□□□□ 0.67
PSEN1P49768 HMGB3P14-201ENST00000494195 599 ntBASIC19.23■□□□□ 0.67
PSEN1P49768 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.23■□□□□ 0.67
PSEN1P49768 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.23■□□□□ 0.67
PSEN1P49768 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.23■□□□□ 0.67
PSEN1P49768 TMEM14EP-202ENST00000639378 1296 ntBASIC19.23■□□□□ 0.67
PSEN1P49768 AL031598.1-201ENST00000561511 1773 ntBASIC19.23■□□□□ 0.67
PSEN1P49768 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.23■□□□□ 0.67
PSEN1P49768 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PSEN1P49768 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.23■□□□□ 0.67
PSEN1P49768 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 KRT89P-201ENST00000620027 1478 ntBASIC19.22■□□□□ 0.67
PSEN1P49768 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PSEN1P49768 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PSEN1P49768 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PSEN1P49768 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.22■□□□□ 0.67
PSEN1P49768 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PSEN1P49768 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.22■□□□□ 0.67
PSEN1P49768 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.22■□□□□ 0.67
PSEN1P49768 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
PSEN1P49768 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.22■□□□□ 0.67
PSEN1P49768 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.22■□□□□ 0.67
PSEN1P49768 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.22■□□□□ 0.67
PSEN1P49768 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.22■□□□□ 0.67
PSEN1P49768 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.22■□□□□ 0.67
PSEN1P49768 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PSEN1P49768 AC024563.2-201ENST00000603282 481 ntBASIC19.22■□□□□ 0.67
PSEN1P49768 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PSEN1P49768 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PSEN1P49768 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.22■□□□□ 0.67
PSEN1P49768 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PSEN1P49768 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PSEN1P49768 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.22■□□□□ 0.67
PSEN1P49768 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PSEN1P49768 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PSEN1P49768 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PSEN1P49768 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms