Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
UBE2AP49459 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2AP49459 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC11.53□□□□□ -0.56
UBE2AP49459 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2AP49459 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2AP49459 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
UBE2AP49459 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC11.52□□□□□ -0.56
UBE2AP49459 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
UBE2AP49459 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC11.52□□□□□ -0.56
UBE2AP49459 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
UBE2AP49459 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
UBE2AP49459 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC11.52□□□□□ -0.56
UBE2AP49459 EFTUD1P1-204ENST00000560401 1798 ntBASIC11.52□□□□□ -0.57
UBE2AP49459 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2AP49459 MTMR9LP-203ENST00000426597 1545 ntBASIC11.52□□□□□ -0.57
UBE2AP49459 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
UBE2AP49459 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC11.52□□□□□ -0.57
UBE2AP49459 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2AP49459 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC11.52□□□□□ -0.57
UBE2AP49459 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC11.52□□□□□ -0.57
UBE2AP49459 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC11.52□□□□□ -0.57
UBE2AP49459 MIR4785-201ENST00000585005 73 ntBASIC11.52□□□□□ -0.57
UBE2AP49459 USP36-216ENST00000589424 970 ntTSL 5 BASIC11.52□□□□□ -0.57
UBE2AP49459 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC11.52□□□□□ -0.57
UBE2AP49459 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC11.52□□□□□ -0.57
UBE2AP49459 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2AP49459 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
UBE2AP49459 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
UBE2AP49459 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2AP49459 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
UBE2AP49459 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 NFYC-AS1-201ENST00000606277 1687 ntBASIC11.52□□□□□ -0.57
UBE2AP49459 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2AP49459 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2AP49459 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC11.51□□□□□ -0.57
UBE2AP49459 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
UBE2AP49459 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
UBE2AP49459 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC11.51□□□□□ -0.57
UBE2AP49459 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC11.51□□□□□ -0.57
UBE2AP49459 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 AC011270.2-201ENST00000624293 2550 ntBASIC11.51□□□□□ -0.57
UBE2AP49459 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC11.51□□□□□ -0.57
UBE2AP49459 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
UBE2AP49459 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC11.51□□□□□ -0.57
UBE2AP49459 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 UNC93B2-201ENST00000285383 730 ntBASIC11.51□□□□□ -0.57
UBE2AP49459 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
UBE2AP49459 MDFI-202ENST00000373050 809 ntTSL 2 BASIC11.51□□□□□ -0.57
UBE2AP49459 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
UBE2AP49459 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
UBE2AP49459 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC11.51□□□□□ -0.57
UBE2AP49459 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC11.51□□□□□ -0.57
UBE2AP49459 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC11.51□□□□□ -0.57
UBE2AP49459 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC11.51□□□□□ -0.57
UBE2AP49459 GRAP-204ENST00000573099 846 ntTSL 3 BASIC11.51□□□□□ -0.57
UBE2AP49459 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.51□□□□□ -0.57
UBE2AP49459 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 AC096733.2-201ENST00000609937 1394 ntBASIC11.51□□□□□ -0.57
UBE2AP49459 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 AC073592.3-201ENST00000625118 1834 ntBASIC11.51□□□□□ -0.57
UBE2AP49459 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2AP49459 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
UBE2AP49459 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms