Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.87□□□□□ -0.03
NKX2-1P43699 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX2-1P43699 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
NKX2-1P43699 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX2-1P43699 MYC-209ENST00000641252 345 ntBASIC14.87□□□□□ -0.03
NKX2-1P43699 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NKX2-1P43699 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX2-1P43699 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.87□□□□□ -0.03
NKX2-1P43699 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.87□□□□□ -0.03
NKX2-1P43699 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NKX2-1P43699 KRT18P55-202ENST00000578578 1546 ntBASIC14.87□□□□□ -0.03
NKX2-1P43699 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
NKX2-1P43699 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
NKX2-1P43699 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NKX2-1P43699 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.86□□□□□ -0.03
NKX2-1P43699 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX2-1P43699 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NKX2-1P43699 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX2-1P43699 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.86□□□□□ -0.03
NKX2-1P43699 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX2-1P43699 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NKX2-1P43699 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.86□□□□□ -0.03
NKX2-1P43699 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.86□□□□□ -0.03
NKX2-1P43699 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.86□□□□□ -0.03
NKX2-1P43699 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NKX2-1P43699 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.86□□□□□ -0.03
NKX2-1P43699 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
NKX2-1P43699 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.86□□□□□ -0.03
NKX2-1P43699 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
NKX2-1P43699 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.86□□□□□ -0.03
NKX2-1P43699 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NKX2-1P43699 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NKX2-1P43699 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 AC011676.5-201ENST00000624864 2660 ntBASIC14.86□□□□□ -0.03
NKX2-1P43699 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NKX2-1P43699 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
NKX2-1P43699 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
NKX2-1P43699 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NKX2-1P43699 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NKX2-1P43699 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NKX2-1P43699 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.85□□□□□ -0.03
NKX2-1P43699 AL109659.2-201ENST00000606809 1674 ntBASIC14.85□□□□□ -0.03
NKX2-1P43699 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.85□□□□□ -0.03
NKX2-1P43699 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NKX2-1P43699 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX2-1P43699 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NKX2-1P43699 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX2-1P43699 AC090192.1-201ENST00000517740 490 ntBASIC14.85□□□□□ -0.03
NKX2-1P43699 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.85□□□□□ -0.03
NKX2-1P43699 AL109923.1-201ENST00000618799 583 ntBASIC14.85□□□□□ -0.03
NKX2-1P43699 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NKX2-1P43699 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms