Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC1A1P43005 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SLC1A1P43005 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SLC1A1P43005 AC132938.6-201ENST00000623828 1655 ntBASIC18.98■□□□□ 0.63
SLC1A1P43005 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC1A1P43005 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC1A1P43005 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC1A1P43005 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC1A1P43005 ECEL1P2-202ENST00000465689 757 ntBASIC18.98■□□□□ 0.63
SLC1A1P43005 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC1A1P43005 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC1A1P43005 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC1A1P43005 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
SLC1A1P43005 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SLC1A1P43005 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC1A1P43005 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SLC1A1P43005 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SLC1A1P43005 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC1A1P43005 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SLC1A1P43005 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC1A1P43005 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC1A1P43005 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC1A1P43005 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 LTB4R2-202ENST00000528054 3092 ntBASIC18.97■□□□□ 0.63
SLC1A1P43005 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC1A1P43005 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC1A1P43005 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SLC1A1P43005 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.97■□□□□ 0.63
SLC1A1P43005 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SLC1A1P43005 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SLC1A1P43005 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC1A1P43005 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SLC1A1P43005 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.97■□□□□ 0.63
SLC1A1P43005 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.97■□□□□ 0.63
SLC1A1P43005 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
SLC1A1P43005 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SLC1A1P43005 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC1A1P43005 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 AC022898.2-201ENST00000616822 1312 ntBASIC18.97■□□□□ 0.63
SLC1A1P43005 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC1A1P43005 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC1A1P43005 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SLC1A1P43005 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC1A1P43005 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC1A1P43005 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SLC1A1P43005 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
SLC1A1P43005 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC1A1P43005 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC1A1P43005 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC1A1P43005 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SLC1A1P43005 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC1A1P43005 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
SLC1A1P43005 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC1A1P43005 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC1A1P43005 PVRIG2P-201ENST00000435460 978 ntBASIC18.96■□□□□ 0.63
SLC1A1P43005 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC1A1P43005 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC1A1P43005 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC1A1P43005 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms