Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
GDNFP39905 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.82■□□□□ 0.12
GDNFP39905 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.82■□□□□ 0.12
GDNFP39905 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.82■□□□□ 0.12
GDNFP39905 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.82■□□□□ 0.12
GDNFP39905 AP001094.4-201ENST00000579008 2176 ntBASIC15.82■□□□□ 0.12
GDNFP39905 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GDNFP39905 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.81■□□□□ 0.12
GDNFP39905 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
GDNFP39905 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDNFP39905 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDNFP39905 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDNFP39905 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDNFP39905 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDNFP39905 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDNFP39905 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
GDNFP39905 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.81■□□□□ 0.12
GDNFP39905 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.81■□□□□ 0.12
GDNFP39905 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.81■□□□□ 0.12
GDNFP39905 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.81■□□□□ 0.12
GDNFP39905 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDNFP39905 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDNFP39905 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDNFP39905 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
GDNFP39905 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GDNFP39905 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.81■□□□□ 0.12
GDNFP39905 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.81■□□□□ 0.12
GDNFP39905 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.81■□□□□ 0.12
GDNFP39905 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.81■□□□□ 0.12
GDNFP39905 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.81■□□□□ 0.12
GDNFP39905 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.81■□□□□ 0.12
GDNFP39905 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDNFP39905 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDNFP39905 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
GDNFP39905 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
GDNFP39905 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.8■□□□□ 0.12
GDNFP39905 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
GDNFP39905 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.8■□□□□ 0.12
GDNFP39905 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.8■□□□□ 0.12
GDNFP39905 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.8■□□□□ 0.12
GDNFP39905 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.8■□□□□ 0.12
GDNFP39905 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.8■□□□□ 0.12
GDNFP39905 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
GDNFP39905 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
GDNFP39905 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.8■□□□□ 0.12
GDNFP39905 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.8■□□□□ 0.12
GDNFP39905 NIFKP9-201ENST00000419265 221 ntBASIC15.8■□□□□ 0.12
GDNFP39905 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.8■□□□□ 0.12
GDNFP39905 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.8■□□□□ 0.12
GDNFP39905 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.8■□□□□ 0.12
GDNFP39905 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.8■□□□□ 0.12
GDNFP39905 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.8■□□□□ 0.12
GDNFP39905 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.8■□□□□ 0.12
GDNFP39905 AL118508.1-201ENST00000613502 2345 ntBASIC15.8■□□□□ 0.12
GDNFP39905 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.8■□□□□ 0.12
GDNFP39905 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
GDNFP39905 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
GDNFP39905 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
GDNFP39905 AL357033.4-201ENST00000617703 1807 ntBASIC15.8■□□□□ 0.12
GDNFP39905 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.8■□□□□ 0.12
GDNFP39905 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDNFP39905 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GDNFP39905 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GDNFP39905 AC006116.8-202ENST00000587620 1550 ntBASIC15.79■□□□□ 0.12
GDNFP39905 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GDNFP39905 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
GDNFP39905 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GDNFP39905 KRT8P32-201ENST00000512863 1461 ntBASIC15.79■□□□□ 0.12
GDNFP39905 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GDNFP39905 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
GDNFP39905 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GDNFP39905 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.79■□□□□ 0.12
GDNFP39905 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GDNFP39905 AL096828.2-201ENST00000567259 1965 ntBASIC15.79■□□□□ 0.12
GDNFP39905 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms