Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.35■□□□□ 0.85
CTGFP29279 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTGFP29279 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTGFP29279 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.34■□□□□ 0.85
CTGFP29279 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTGFP29279 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTGFP29279 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.34■□□□□ 0.85
CTGFP29279 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.34■□□□□ 0.85
CTGFP29279 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.34■□□□□ 0.85
CTGFP29279 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.34■□□□□ 0.85
CTGFP29279 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.34■□□□□ 0.85
CTGFP29279 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.34■□□□□ 0.85
CTGFP29279 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.34■□□□□ 0.85
CTGFP29279 AC132938.6-201ENST00000623828 1655 ntBASIC20.34■□□□□ 0.85
CTGFP29279 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTGFP29279 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.34■□□□□ 0.85
CTGFP29279 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTGFP29279 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
CTGFP29279 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.34■□□□□ 0.85
CTGFP29279 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
CTGFP29279 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTGFP29279 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTGFP29279 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTGFP29279 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTGFP29279 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
CTGFP29279 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CTGFP29279 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTGFP29279 IGLL3P-201ENST00000412472 434 ntBASIC20.33■□□□□ 0.85
CTGFP29279 COX20P2-201ENST00000452636 358 ntBASIC20.33■□□□□ 0.85
CTGFP29279 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.33■□□□□ 0.85
CTGFP29279 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTGFP29279 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.33■□□□□ 0.85
CTGFP29279 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.33■□□□□ 0.85
CTGFP29279 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CTGFP29279 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CTGFP29279 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CTGFP29279 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CTGFP29279 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.33■□□□□ 0.84
CTGFP29279 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTGFP29279 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTGFP29279 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CTGFP29279 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.33■□□□□ 0.84
CTGFP29279 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.33■□□□□ 0.84
CTGFP29279 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.33■□□□□ 0.84
CTGFP29279 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
CTGFP29279 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTGFP29279 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CTGFP29279 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTGFP29279 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.32■□□□□ 0.84
CTGFP29279 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTGFP29279 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.32■□□□□ 0.84
CTGFP29279 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CTGFP29279 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTGFP29279 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CTGFP29279 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTGFP29279 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.32■□□□□ 0.84
CTGFP29279 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.32■□□□□ 0.84
CTGFP29279 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.32■□□□□ 0.84
CTGFP29279 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTGFP29279 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CTGFP29279 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTGFP29279 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTGFP29279 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.32■□□□□ 0.84
CTGFP29279 MIR4751-201ENST00000578027 74 ntBASIC20.32■□□□□ 0.84
CTGFP29279 AC011467.4-201ENST00000594891 528 ntBASIC20.32■□□□□ 0.84
CTGFP29279 AC239800.4-201ENST00000603712 296 ntBASIC20.32■□□□□ 0.84
CTGFP29279 AL589182.2-201ENST00000619332 1049 ntBASIC20.32■□□□□ 0.84
CTGFP29279 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.32■□□□□ 0.84
CTGFP29279 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.32■□□□□ 0.84
CTGFP29279 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTGFP29279 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.32■□□□□ 0.84
CTGFP29279 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.32■□□□□ 0.84
CTGFP29279 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTGFP29279 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTGFP29279 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTGFP29279 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CTGFP29279 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.31■□□□□ 0.84
CTGFP29279 AC096633.1-201ENST00000422446 749 ntBASIC20.31■□□□□ 0.84
CTGFP29279 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.31■□□□□ 0.84
CTGFP29279 BCRP1-201ENST00000444246 691 ntBASIC20.31■□□□□ 0.84
CTGFP29279 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.31■□□□□ 0.84
CTGFP29279 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.31■□□□□ 0.84
CTGFP29279 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CTGFP29279 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.31■□□□□ 0.84
CTGFP29279 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.31■□□□□ 0.84
CTGFP29279 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.31■□□□□ 0.84
CTGFP29279 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.31■□□□□ 0.84
CTGFP29279 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.31■□□□□ 0.84
CTGFP29279 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.31■□□□□ 0.84
CTGFP29279 AC004790.2-201ENST00000623588 572 ntBASIC20.31■□□□□ 0.84
CTGFP29279 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTGFP29279 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CTGFP29279 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTGFP29279 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTGFP29279 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTGFP29279 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTGFP29279 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTGFP29279 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CTGFP29279 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.3■□□□□ 0.84
CTGFP29279 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms