Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN1P18031 AL353801.3-201ENST00000609898 542 ntBASIC19.16■□□□□ 0.66
PTPN1P18031 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPN1P18031 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.16■□□□□ 0.66
PTPN1P18031 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN1P18031 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN1P18031 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN1P18031 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PTPN1P18031 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN1P18031 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN1P18031 NEFHP1-201ENST00000412845 2629 ntBASIC19.16■□□□□ 0.66
PTPN1P18031 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN1P18031 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN1P18031 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN1P18031 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN1P18031 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN1P18031 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN1P18031 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN1P18031 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN1P18031 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
PTPN1P18031 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.15■□□□□ 0.66
PTPN1P18031 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN1P18031 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN1P18031 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.15■□□□□ 0.66
PTPN1P18031 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PTPN1P18031 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN1P18031 MTCL1P1-201ENST00000446207 792 ntBASIC19.15■□□□□ 0.66
PTPN1P18031 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PTPN1P18031 AC091607.1-201ENST00000490318 1060 ntBASIC19.15■□□□□ 0.66
PTPN1P18031 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.15■□□□□ 0.66
PTPN1P18031 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN1P18031 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PTPN1P18031 Z69720.1-201ENST00000601483 472 ntBASIC19.15■□□□□ 0.66
PTPN1P18031 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.15■□□□□ 0.66
PTPN1P18031 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.15■□□□□ 0.66
PTPN1P18031 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PTPN1P18031 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN1P18031 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN1P18031 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN1P18031 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTPN1P18031 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTPN1P18031 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.14■□□□□ 0.66
PTPN1P18031 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.14■□□□□ 0.66
PTPN1P18031 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
PTPN1P18031 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN1P18031 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.14■□□□□ 0.65
PTPN1P18031 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN1P18031 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN1P18031 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN1P18031 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN1P18031 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN1P18031 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN1P18031 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN1P18031 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN1P18031 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN1P18031 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN1P18031 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.14■□□□□ 0.65
PTPN1P18031 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.14■□□□□ 0.65
PTPN1P18031 AC012615.1-201ENST00000565797 1299 ntBASIC19.14■□□□□ 0.65
PTPN1P18031 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN1P18031 AP005901.3-202ENST00000581653 237 ntBASIC19.14■□□□□ 0.65
PTPN1P18031 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
PTPN1P18031 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN1P18031 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN1P18031 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN1P18031 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN1P18031 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN1P18031 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PTPN1P18031 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.13■□□□□ 0.65
PTPN1P18031 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPN1P18031 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
PTPN1P18031 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPN1P18031 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.13■□□□□ 0.65
PTPN1P18031 AC246785.2-201ENST00000432512 513 ntBASIC19.13■□□□□ 0.65
PTPN1P18031 KRT17P6-201ENST00000453795 1220 ntBASIC19.13■□□□□ 0.65
PTPN1P18031 VENTXP7-201ENST00000475503 772 ntBASIC19.13■□□□□ 0.65
PTPN1P18031 AC104819.1-201ENST00000504587 486 ntBASIC19.13■□□□□ 0.65
PTPN1P18031 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.13■□□□□ 0.65
PTPN1P18031 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.13■□□□□ 0.65
PTPN1P18031 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.13■□□□□ 0.65
PTPN1P18031 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.13■□□□□ 0.65
PTPN1P18031 AC074051.2-201ENST00000565115 352 ntBASIC19.13■□□□□ 0.65
PTPN1P18031 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.13■□□□□ 0.65
PTPN1P18031 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN1P18031 AC012313.10-201ENST00000623509 926 ntBASIC19.13■□□□□ 0.65
PTPN1P18031 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.13■□□□□ 0.65
PTPN1P18031 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms