Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BCKDHAP12694 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
BCKDHAP12694 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BCKDHAP12694 AC010947.1-201ENST00000623454 693 ntBASIC17.34■□□□□ 0.37
BCKDHAP12694 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.34■□□□□ 0.37
BCKDHAP12694 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BCKDHAP12694 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BCKDHAP12694 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BCKDHAP12694 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BCKDHAP12694 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BCKDHAP12694 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.34■□□□□ 0.37
BCKDHAP12694 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BCKDHAP12694 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BCKDHAP12694 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BCKDHAP12694 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
BCKDHAP12694 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.33■□□□□ 0.37
BCKDHAP12694 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHAP12694 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHAP12694 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHAP12694 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHAP12694 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHAP12694 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
BCKDHAP12694 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHAP12694 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHAP12694 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
BCKDHAP12694 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHAP12694 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
BCKDHAP12694 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHAP12694 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.33■□□□□ 0.36
BCKDHAP12694 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.33■□□□□ 0.36
BCKDHAP12694 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.33■□□□□ 0.36
BCKDHAP12694 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
BCKDHAP12694 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHAP12694 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.33■□□□□ 0.36
BCKDHAP12694 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHAP12694 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHAP12694 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHAP12694 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHAP12694 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
BCKDHAP12694 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHAP12694 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.33■□□□□ 0.36
BCKDHAP12694 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHAP12694 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BCKDHAP12694 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.32■□□□□ 0.36
BCKDHAP12694 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHAP12694 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHAP12694 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.32■□□□□ 0.36
BCKDHAP12694 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHAP12694 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHAP12694 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
BCKDHAP12694 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
BCKDHAP12694 AC009947.2-201ENST00000444014 672 ntBASIC17.32■□□□□ 0.36
BCKDHAP12694 AC128688.1-201ENST00000487626 519 ntBASIC17.32■□□□□ 0.36
BCKDHAP12694 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHAP12694 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
BCKDHAP12694 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHAP12694 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.32■□□□□ 0.36
BCKDHAP12694 MIR4497-201ENST00000583208 89 ntBASIC17.32■□□□□ 0.36
BCKDHAP12694 AC024243.1-201ENST00000609234 778 ntBASIC17.32■□□□□ 0.36
BCKDHAP12694 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHAP12694 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHAP12694 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHAP12694 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
BCKDHAP12694 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHAP12694 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.31■□□□□ 0.36
BCKDHAP12694 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
BCKDHAP12694 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
BCKDHAP12694 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.31■□□□□ 0.36
BCKDHAP12694 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.31■□□□□ 0.36
BCKDHAP12694 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.31■□□□□ 0.36
BCKDHAP12694 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.31■□□□□ 0.36
BCKDHAP12694 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.31■□□□□ 0.36
BCKDHAP12694 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.31■□□□□ 0.36
BCKDHAP12694 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.31■□□□□ 0.36
BCKDHAP12694 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.31■□□□□ 0.36
BCKDHAP12694 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.31■□□□□ 0.36
BCKDHAP12694 AC132938.6-201ENST00000623828 1655 ntBASIC17.31■□□□□ 0.36
BCKDHAP12694 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.31■□□□□ 0.36
BCKDHAP12694 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
BCKDHAP12694 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHAP12694 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms