Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBL4AP11441 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBL4AP11441 AC009053.2-201ENST00000563701 2365 ntBASIC16.79■□□□□ 0.28
UBL4AP11441 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
UBL4AP11441 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBL4AP11441 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
UBL4AP11441 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBL4AP11441 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UBL4AP11441 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBL4AP11441 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBL4AP11441 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UBL4AP11441 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBL4AP11441 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.79■□□□□ 0.28
UBL4AP11441 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.79■□□□□ 0.28
UBL4AP11441 COX11P1-201ENST00000489116 835 ntBASIC16.79■□□□□ 0.28
UBL4AP11441 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.79■□□□□ 0.28
UBL4AP11441 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.79■□□□□ 0.28
UBL4AP11441 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
UBL4AP11441 AC140113.3-201ENST00000605663 199 ntBASIC16.79■□□□□ 0.28
UBL4AP11441 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
UBL4AP11441 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
UBL4AP11441 AL031432.5-201ENST00000641059 760 ntBASIC16.79■□□□□ 0.28
UBL4AP11441 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBL4AP11441 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.79■□□□□ 0.28
UBL4AP11441 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.79■□□□□ 0.28
UBL4AP11441 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBL4AP11441 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
UBL4AP11441 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.79■□□□□ 0.28
UBL4AP11441 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
UBL4AP11441 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
UBL4AP11441 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBL4AP11441 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.79■□□□□ 0.28
UBL4AP11441 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UBL4AP11441 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.78■□□□□ 0.28
UBL4AP11441 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
UBL4AP11441 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
UBL4AP11441 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
UBL4AP11441 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.78■□□□□ 0.28
UBL4AP11441 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.78■□□□□ 0.28
UBL4AP11441 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
UBL4AP11441 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
UBL4AP11441 AC018470.1-201ENST00000624790 3129 ntBASIC16.78■□□□□ 0.28
UBL4AP11441 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
UBL4AP11441 AC005521.1-201ENST00000393351 872 ntBASIC16.78■□□□□ 0.28
UBL4AP11441 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.78■□□□□ 0.28
UBL4AP11441 AC034232.1-201ENST00000506026 1064 ntBASIC16.78■□□□□ 0.28
UBL4AP11441 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.78■□□□□ 0.28
UBL4AP11441 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.78■□□□□ 0.28
UBL4AP11441 GCSHP2-201ENST00000560971 527 ntBASIC16.78■□□□□ 0.28
UBL4AP11441 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.78■□□□□ 0.28
UBL4AP11441 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
UBL4AP11441 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.78■□□□□ 0.28
UBL4AP11441 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.78■□□□□ 0.28
UBL4AP11441 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.78■□□□□ 0.28
UBL4AP11441 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
UBL4AP11441 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.78■□□□□ 0.28
UBL4AP11441 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.78■□□□□ 0.28
UBL4AP11441 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
UBL4AP11441 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBL4AP11441 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBL4AP11441 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
UBL4AP11441 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
UBL4AP11441 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBL4AP11441 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBL4AP11441 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBL4AP11441 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
UBL4AP11441 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
UBL4AP11441 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBL4AP11441 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBL4AP11441 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBL4AP11441 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
UBL4AP11441 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBL4AP11441 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
UBL4AP11441 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBL4AP11441 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBL4AP11441 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBL4AP11441 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.77■□□□□ 0.28
UBL4AP11441 BX664615.1-201ENST00000443558 458 ntBASIC16.77■□□□□ 0.28
UBL4AP11441 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.77■□□□□ 0.28
UBL4AP11441 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.77■□□□□ 0.28
UBL4AP11441 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBL4AP11441 AL157888.1-201ENST00000631930 593 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms