Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SP9P0CG40 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
SP9P0CG40 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SP9P0CG40 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SP9P0CG40 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SP9P0CG40 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SP9P0CG40 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SP9P0CG40 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.76■□□□□ 0.43
SP9P0CG40 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
SP9P0CG40 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
SP9P0CG40 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.75■□□□□ 0.43
SP9P0CG40 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SP9P0CG40 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SP9P0CG40 PKD1P6-201ENST00000343738 4769 ntBASIC17.75■□□□□ 0.43
SP9P0CG40 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SP9P0CG40 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
SP9P0CG40 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.75■□□□□ 0.43
SP9P0CG40 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SP9P0CG40 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SP9P0CG40 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
SP9P0CG40 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SP9P0CG40 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SP9P0CG40 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.75■□□□□ 0.43
SP9P0CG40 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SP9P0CG40 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SP9P0CG40 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.75■□□□□ 0.43
SP9P0CG40 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.75■□□□□ 0.43
SP9P0CG40 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.75■□□□□ 0.43
SP9P0CG40 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.75■□□□□ 0.43
SP9P0CG40 KRT19P2-202ENST00000557173 1012 ntBASIC17.75■□□□□ 0.43
SP9P0CG40 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.75■□□□□ 0.43
SP9P0CG40 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.75■□□□□ 0.43
SP9P0CG40 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SP9P0CG40 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SP9P0CG40 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.75■□□□□ 0.43
SP9P0CG40 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.75■□□□□ 0.43
SP9P0CG40 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.74■□□□□ 0.43
SP9P0CG40 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.74■□□□□ 0.43
SP9P0CG40 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
SP9P0CG40 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SP9P0CG40 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 AC015922.1-201ENST00000421102 1152 ntBASIC17.74■□□□□ 0.43
SP9P0CG40 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.74■□□□□ 0.43
SP9P0CG40 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SP9P0CG40 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.74■□□□□ 0.43
SP9P0CG40 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SP9P0CG40 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.74■□□□□ 0.43
SP9P0CG40 AC073592.5-201ENST00000624854 528 ntBASIC17.74■□□□□ 0.43
SP9P0CG40 AC010507.1-201ENST00000633895 436 ntBASIC17.74■□□□□ 0.43
SP9P0CG40 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.74■□□□□ 0.43
SP9P0CG40 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SP9P0CG40 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 AIRN-201ENST00000601203 4374 ntBASIC17.74■□□□□ 0.43
SP9P0CG40 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SP9P0CG40 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.73■□□□□ 0.43
SP9P0CG40 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SP9P0CG40 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SP9P0CG40 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
SP9P0CG40 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SP9P0CG40 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.73■□□□□ 0.43
SP9P0CG40 AC004461.1-201ENST00000412461 403 ntBASIC17.73■□□□□ 0.43
SP9P0CG40 AC074386.1-202ENST00000463561 864 ntBASIC17.73■□□□□ 0.43
SP9P0CG40 AC109322.1-201ENST00000524499 1264 ntBASIC17.73■□□□□ 0.43
SP9P0CG40 AC096734.2-201ENST00000562054 433 ntBASIC17.73■□□□□ 0.43
SP9P0CG40 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.73■□□□□ 0.43
SP9P0CG40 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.73■□□□□ 0.43
SP9P0CG40 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.73■□□□□ 0.43
SP9P0CG40 AC010654.1-201ENST00000615722 808 ntBASIC17.73■□□□□ 0.43
SP9P0CG40 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SP9P0CG40 Z92544.3-201ENST00000624747 417 ntBASIC17.73■□□□□ 0.43
SP9P0CG40 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.73■□□□□ 0.43
SP9P0CG40 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SP9P0CG40 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SP9P0CG40 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.73■□□□□ 0.43
SP9P0CG40 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SP9P0CG40 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SP9P0CG40 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SP9P0CG40 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SP9P0CG40 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.73■□□□□ 0.43
SP9P0CG40 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SP9P0CG40 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SP9P0CG40 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SP9P0CG40 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SP9P0CG40 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SP9P0CG40 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms