Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 PRORSD1P-202ENST00000563365 2154 ntBASIC19.63■□□□□ 0.73
CCDC172P0C7W6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 AL391005.1-201ENST00000623953 2435 ntBASIC19.62■□□□□ 0.73
CCDC172P0C7W6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.62■□□□□ 0.73
CCDC172P0C7W6 SNORA78-201ENST00000459373 127 ntBASIC19.62■□□□□ 0.73
CCDC172P0C7W6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC172P0C7W6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC172P0C7W6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC172P0C7W6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC172P0C7W6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms