Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40ALP0C0E4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40ALP0C0E4 AC005082.1-201ENST00000413042 2259 ntBASIC17.08■□□□□ 0.33
RAB40ALP0C0E4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40ALP0C0E4 SDHAP2-201ENST00000455183 2001 ntBASIC17.08■□□□□ 0.33
RAB40ALP0C0E4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40ALP0C0E4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RAB40ALP0C0E4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RAB40ALP0C0E4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40ALP0C0E4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40ALP0C0E4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.08■□□□□ 0.33
RAB40ALP0C0E4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 AC079781.3-201ENST00000449110 356 ntBASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 AC091607.1-201ENST00000490318 1060 ntBASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 HCG11-201ENST00000411553 5696 ntBASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAB40ALP0C0E4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 NUS1P2-201ENST00000417358 873 ntBASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 SAPCD2P3-201ENST00000455031 850 ntBASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 AC009078.2-202ENST00000463353 338 ntBASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 AC106795.1-205ENST00000512851 1056 ntBASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 AL662844.1-201ENST00000546340 181 ntBASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
RAB40ALP0C0E4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 AL024508.2-201ENST00000607749 1894 ntBASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 AP002469.2-201ENST00000531724 424 ntBASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 REXO1L6P-202ENST00000619970 1078 ntBASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms