Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HOXC6P09630 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.41■□□□□ 0.86
HOXC6P09630 LAGE3P1-201ENST00000425356 484 ntBASIC20.41■□□□□ 0.86
HOXC6P09630 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.41■□□□□ 0.86
HOXC6P09630 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXC6P09630 UNC93B6-202ENST00000528242 690 ntBASIC20.41■□□□□ 0.86
HOXC6P09630 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.41■□□□□ 0.86
HOXC6P09630 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.41■□□□□ 0.86
HOXC6P09630 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HOXC6P09630 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.41■□□□□ 0.86
HOXC6P09630 AC097374.2-201ENST00000618617 1306 ntBASIC20.41■□□□□ 0.86
HOXC6P09630 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC6P09630 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.41■□□□□ 0.86
HOXC6P09630 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC6P09630 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
HOXC6P09630 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC6P09630 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC6P09630 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC6P09630 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HOXC6P09630 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC6P09630 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HOXC6P09630 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC6P09630 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC6P09630 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC6P09630 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC6P09630 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
HOXC6P09630 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC6P09630 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.4■□□□□ 0.86
HOXC6P09630 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC6P09630 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.4■□□□□ 0.86
HOXC6P09630 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HOXC6P09630 DNAJB3-201ENST00000446806 729 ntBASIC20.4■□□□□ 0.86
HOXC6P09630 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC6P09630 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.4■□□□□ 0.86
HOXC6P09630 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.4■□□□□ 0.86
HOXC6P09630 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC6P09630 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HOXC6P09630 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.4■□□□□ 0.86
HOXC6P09630 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
HOXC6P09630 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.4■□□□□ 0.86
HOXC6P09630 AC010327.4-202ENST00000591484 748 ntBASIC20.4■□□□□ 0.86
HOXC6P09630 AP001160.2-201ENST00000596071 487 ntBASIC20.4■□□□□ 0.86
HOXC6P09630 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.4■□□□□ 0.86
HOXC6P09630 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.4■□□□□ 0.86
HOXC6P09630 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.4■□□□□ 0.86
HOXC6P09630 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.39■□□□□ 0.86
HOXC6P09630 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HOXC6P09630 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC6P09630 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC6P09630 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC6P09630 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC6P09630 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HOXC6P09630 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC6P09630 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC6P09630 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
HOXC6P09630 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC6P09630 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.39■□□□□ 0.85
HOXC6P09630 AC112482.1-201ENST00000492080 688 ntBASIC20.39■□□□□ 0.85
HOXC6P09630 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.39■□□□□ 0.85
HOXC6P09630 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.39■□□□□ 0.85
HOXC6P09630 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.39■□□□□ 0.85
HOXC6P09630 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC6P09630 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC6P09630 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC6P09630 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.39■□□□□ 0.85
HOXC6P09630 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC6P09630 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
HOXC6P09630 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC6P09630 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC6P09630 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC6P09630 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC6P09630 AP002414.3-201ENST00000589352 1468 ntBASIC20.38■□□□□ 0.85
HOXC6P09630 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXC6P09630 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HOXC6P09630 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC6P09630 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
HOXC6P09630 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC6P09630 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC6P09630 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC6P09630 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.38■□□□□ 0.85
HOXC6P09630 AC004832.2-201ENST00000426397 482 ntBASIC20.38■□□□□ 0.85
HOXC6P09630 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXC6P09630 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HOXC6P09630 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXC6P09630 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXC6P09630 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC6P09630 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.38■□□□□ 0.85
HOXC6P09630 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXC6P09630 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC6P09630 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC6P09630 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC6P09630 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
HOXC6P09630 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.38■□□□□ 0.85
HOXC6P09630 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
HOXC6P09630 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.37■□□□□ 0.85
HOXC6P09630 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC6P09630 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC6P09630 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HOXC6P09630 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
HOXC6P09630 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms