Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.71■□□□□ 0.11
CSF1P09603 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.71■□□□□ 0.11
CSF1P09603 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSF1P09603 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSF1P09603 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.71■□□□□ 0.11
CSF1P09603 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSF1P09603 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSF1P09603 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CSF1P09603 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CSF1P09603 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CSF1P09603 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CSF1P09603 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CSF1P09603 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.71■□□□□ 0.1
CSF1P09603 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CSF1P09603 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CSF1P09603 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.71■□□□□ 0.1
CSF1P09603 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CSF1P09603 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.71■□□□□ 0.1
CSF1P09603 MYLKP1-201ENST00000509077 1580 ntBASIC15.7■□□□□ 0.1
CSF1P09603 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CSF1P09603 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.7■□□□□ 0.1
CSF1P09603 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.7■□□□□ 0.1
CSF1P09603 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CSF1P09603 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CSF1P09603 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.7■□□□□ 0.1
CSF1P09603 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CSF1P09603 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CSF1P09603 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.7■□□□□ 0.1
CSF1P09603 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.7■□□□□ 0.1
CSF1P09603 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.7■□□□□ 0.1
CSF1P09603 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.7■□□□□ 0.1
CSF1P09603 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.7■□□□□ 0.1
CSF1P09603 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CSF1P09603 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.7■□□□□ 0.1
CSF1P09603 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.7■□□□□ 0.1
CSF1P09603 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.7■□□□□ 0.1
CSF1P09603 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSF1P09603 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CSF1P09603 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CSF1P09603 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CSF1P09603 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSF1P09603 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSF1P09603 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSF1P09603 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CSF1P09603 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CSF1P09603 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSF1P09603 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSF1P09603 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CSF1P09603 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.69■□□□□ 0.1
CSF1P09603 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSF1P09603 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSF1P09603 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSF1P09603 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSF1P09603 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.69■□□□□ 0.1
CSF1P09603 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.69■□□□□ 0.1
CSF1P09603 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.69■□□□□ 0.1
CSF1P09603 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSF1P09603 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSF1P09603 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.69■□□□□ 0.1
CSF1P09603 AL096828.2-201ENST00000567259 1965 ntBASIC15.69■□□□□ 0.1
CSF1P09603 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSF1P09603 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSF1P09603 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CSF1P09603 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.68■□□□□ 0.1
CSF1P09603 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSF1P09603 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.68■□□□□ 0.1
CSF1P09603 PP12613-201ENST00000424958 2230 ntBASIC15.68■□□□□ 0.1
CSF1P09603 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSF1P09603 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSF1P09603 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSF1P09603 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.68■□□□□ 0.1
CSF1P09603 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CSF1P09603 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.68■□□□□ 0.1
CSF1P09603 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSF1P09603 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSF1P09603 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.68■□□□□ 0.1
CSF1P09603 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CSF1P09603 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.68■□□□□ 0.1
CSF1P09603 AC006116.8-202ENST00000587620 1550 ntBASIC15.68■□□□□ 0.1
CSF1P09603 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CSF1P09603 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSF1P09603 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSF1P09603 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSF1P09603 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms