Protein–RNA interactions for Protein: P08034

GJB1, Gap junction beta-1 protein, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1P08034 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GJB1P08034 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
GJB1P08034 AL035633.1-201ENST00000406139 838 ntBASIC20.43■□□□□ 0.86
GJB1P08034 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
GJB1P08034 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.43■□□□□ 0.86
GJB1P08034 MCCD1P2-201ENST00000423228 335 ntBASIC20.43■□□□□ 0.86
GJB1P08034 AL645939.2-201ENST00000427340 991 ntBASIC20.43■□□□□ 0.86
GJB1P08034 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GJB1P08034 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.43■□□□□ 0.86
GJB1P08034 YBX1P5-201ENST00000509441 847 ntBASIC20.43■□□□□ 0.86
GJB1P08034 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GJB1P08034 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GJB1P08034 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.43■□□□□ 0.86
GJB1P08034 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GJB1P08034 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GJB1P08034 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GJB1P08034 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GJB1P08034 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GJB1P08034 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
GJB1P08034 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GJB1P08034 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
GJB1P08034 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.42■□□□□ 0.86
GJB1P08034 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GJB1P08034 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
GJB1P08034 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.42■□□□□ 0.86
GJB1P08034 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GJB1P08034 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
GJB1P08034 AC254562.1-201ENST00000417586 456 ntBASIC20.42■□□□□ 0.86
GJB1P08034 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.42■□□□□ 0.86
GJB1P08034 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.42■□□□□ 0.86
GJB1P08034 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.42■□□□□ 0.86
GJB1P08034 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.42■□□□□ 0.86
GJB1P08034 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.42■□□□□ 0.86
GJB1P08034 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.42■□□□□ 0.86
GJB1P08034 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.42■□□□□ 0.86
GJB1P08034 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.42■□□□□ 0.86
GJB1P08034 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.42■□□□□ 0.86
GJB1P08034 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GJB1P08034 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.42■□□□□ 0.86
GJB1P08034 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GJB1P08034 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.42■□□□□ 0.86
GJB1P08034 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GJB1P08034 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.41■□□□□ 0.86
GJB1P08034 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.41■□□□□ 0.86
GJB1P08034 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
GJB1P08034 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.41■□□□□ 0.86
GJB1P08034 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.41■□□□□ 0.86
GJB1P08034 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.41■□□□□ 0.86
GJB1P08034 AC008687.5-201ENST00000593746 558 ntBASIC20.41■□□□□ 0.86
GJB1P08034 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.41■□□□□ 0.86
GJB1P08034 MTDHP4-201ENST00000600287 670 ntBASIC20.41■□□□□ 0.86
GJB1P08034 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.41■□□□□ 0.86
GJB1P08034 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.41■□□□□ 0.86
GJB1P08034 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.41■□□□□ 0.86
GJB1P08034 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
GJB1P08034 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.41■□□□□ 0.86
GJB1P08034 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.41■□□□□ 0.86
GJB1P08034 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GJB1P08034 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
GJB1P08034 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.41■□□□□ 0.86
GJB1P08034 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GJB1P08034 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GJB1P08034 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GJB1P08034 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.4■□□□□ 0.86
GJB1P08034 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GJB1P08034 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GJB1P08034 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.4■□□□□ 0.86
GJB1P08034 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GJB1P08034 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GJB1P08034 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.4■□□□□ 0.86
GJB1P08034 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.4■□□□□ 0.86
GJB1P08034 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.4■□□□□ 0.86
GJB1P08034 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GJB1P08034 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.4■□□□□ 0.86
GJB1P08034 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.4■□□□□ 0.86
GJB1P08034 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.4■□□□□ 0.86
GJB1P08034 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.4■□□□□ 0.86
GJB1P08034 NKAPP1-205ENST00000585790 367 ntBASIC20.4■□□□□ 0.86
GJB1P08034 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GJB1P08034 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.4■□□□□ 0.86
GJB1P08034 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.4■□□□□ 0.86
GJB1P08034 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.4■□□□□ 0.86
GJB1P08034 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms