Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 KRT8P3-201ENST00000519669 1449 ntBASIC16.33■□□□□ 0.2
HLA-DPB1P04440 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.33■□□□□ 0.2
HLA-DPB1P04440 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 AC004951.3-201ENST00000418645 1148 ntBASIC16.32■□□□□ 0.2
HLA-DPB1P04440 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 AL355355.2-201ENST00000442321 338 ntBASIC16.32■□□□□ 0.2
HLA-DPB1P04440 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 SNORA78-201ENST00000459373 127 ntBASIC16.32■□□□□ 0.2
HLA-DPB1P04440 AC091390.4-202ENST00000476426 537 ntBASIC16.32■□□□□ 0.2
HLA-DPB1P04440 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 AC093827.2-201ENST00000512654 315 ntBASIC16.32■□□□□ 0.2
HLA-DPB1P04440 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 AC026271.3-201ENST00000571884 352 ntBASIC16.32■□□□□ 0.2
HLA-DPB1P04440 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 AC084018.2-201ENST00000613093 2607 ntBASIC16.32■□□□□ 0.2
HLA-DPB1P04440 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 MIR6786-201ENST00000616843 113 ntBASIC16.32■□□□□ 0.2
HLA-DPB1P04440 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 AD000864.1-201ENST00000624076 2295 ntBASIC16.32■□□□□ 0.2
HLA-DPB1P04440 AC066615.1-201ENST00000640911 628 ntBASIC16.32■□□□□ 0.2
HLA-DPB1P04440 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DPB1P04440 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 AC008040.2-201ENST00000461049 708 ntBASIC16.31■□□□□ 0.2
HLA-DPB1P04440 B3GAT3P1-201ENST00000471720 806 ntBASIC16.31■□□□□ 0.2
HLA-DPB1P04440 NUDT16P1-203ENST00000513809 620 ntBASIC16.31■□□□□ 0.2
HLA-DPB1P04440 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 AC141586.5-201ENST00000624546 2050 ntBASIC16.31■□□□□ 0.2
HLA-DPB1P04440 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 AL096828.2-201ENST00000567259 1965 ntBASIC16.31■□□□□ 0.2
HLA-DPB1P04440 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DPB1P04440 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms