Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 PCDHAC2-203ENST00000615316 3011 ntBASIC11.24□□□□□ -0.61
APOBP04114 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
APOBP04114 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
APOBP04114 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 AC092474.2-201ENST00000424288 719 ntBASIC11.24□□□□□ -0.61
APOBP04114 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.24□□□□□ -0.61
APOBP04114 AC069262.1-201ENST00000539058 672 ntBASIC11.24□□□□□ -0.61
APOBP04114 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC11.24□□□□□ -0.61
APOBP04114 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC11.24□□□□□ -0.61
APOBP04114 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC11.24□□□□□ -0.61
APOBP04114 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC11.24□□□□□ -0.61
APOBP04114 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
APOBP04114 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC11.24□□□□□ -0.61
APOBP04114 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
APOBP04114 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.24□□□□□ -0.61
APOBP04114 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.24□□□□□ -0.61
APOBP04114 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOBP04114 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC11.24□□□□□ -0.61
APOBP04114 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOBP04114 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOBP04114 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC11.23□□□□□ -0.61
APOBP04114 AC096633.1-201ENST00000422446 749 ntBASIC11.23□□□□□ -0.61
APOBP04114 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.23□□□□□ -0.61
APOBP04114 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOBP04114 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
APOBP04114 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOBP04114 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
APOBP04114 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
APOBP04114 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOBP04114 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOBP04114 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC11.23□□□□□ -0.61
APOBP04114 USP48-205ENST00000421625 2818 ntTSL 2 BASIC11.23□□□□□ -0.61
APOBP04114 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC11.23□□□□□ -0.61
APOBP04114 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC11.23□□□□□ -0.61
APOBP04114 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.23□□□□□ -0.61
APOBP04114 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.23□□□□□ -0.61
APOBP04114 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC11.23□□□□□ -0.61
APOBP04114 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.23□□□□□ -0.61
APOBP04114 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOBP04114 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC11.23□□□□□ -0.61
APOBP04114 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.23□□□□□ -0.61
APOBP04114 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOBP04114 AC132938.5-201ENST00000624980 1813 ntBASIC11.23□□□□□ -0.61
APOBP04114 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC11.23□□□□□ -0.61
APOBP04114 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
APOBP04114 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC11.23□□□□□ -0.61
APOBP04114 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOBP04114 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOBP04114 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
APOBP04114 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOBP04114 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.23□□□□□ -0.61
APOBP04114 CCND1-203ENST00000536559 553 ntTSL 3 BASIC11.23□□□□□ -0.61
APOBP04114 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.23□□□□□ -0.61
APOBP04114 AC051619.7-201ENST00000568314 623 ntBASIC11.23□□□□□ -0.61
APOBP04114 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOBP04114 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
APOBP04114 AL049812.1-201ENST00000432563 2267 ntBASIC11.23□□□□□ -0.61
APOBP04114 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
APOBP04114 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC11.23□□□□□ -0.61
APOBP04114 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC11.23□□□□□ -0.61
APOBP04114 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOBP04114 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.23□□□□□ -0.61
APOBP04114 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.23□□□□□ -0.61
APOBP04114 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.23□□□□□ -0.61
APOBP04114 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOBP04114 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC11.22□□□□□ -0.61
APOBP04114 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOBP04114 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC11.22□□□□□ -0.61
APOBP04114 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
APOBP04114 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOBP04114 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
APOBP04114 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOBP04114 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOBP04114 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
APOBP04114 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
APOBP04114 AC007952.6-201ENST00000573168 2673 ntBASIC11.22□□□□□ -0.61
APOBP04114 AC003957.1-201ENST00000625108 2673 ntBASIC11.22□□□□□ -0.61
APOBP04114 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
APOBP04114 AC010460.3-201ENST00000511359 1579 ntBASIC11.22□□□□□ -0.61
APOBP04114 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOBP04114 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOBP04114 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
APOBP04114 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
APOBP04114 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC11.22□□□□□ -0.61
APOBP04114 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
APOBP04114 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOBP04114 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms