Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD3O95983 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
MBD3O95983 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
MBD3O95983 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
MBD3O95983 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.8■□□□□ 0.92
MBD3O95983 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.8■□□□□ 0.92
MBD3O95983 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 AC239809.2-201ENST00000415381 517 ntBASIC20.8■□□□□ 0.92
MBD3O95983 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
MBD3O95983 AC026271.3-201ENST00000571884 352 ntBASIC20.8■□□□□ 0.92
MBD3O95983 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
MBD3O95983 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.8■□□□□ 0.92
MBD3O95983 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.8■□□□□ 0.92
MBD3O95983 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.8■□□□□ 0.92
MBD3O95983 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MBD3O95983 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD3O95983 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.79■□□□□ 0.92
MBD3O95983 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD3O95983 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
MBD3O95983 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
MBD3O95983 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.79■□□□□ 0.92
MBD3O95983 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD3O95983 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
MBD3O95983 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
MBD3O95983 AC069152.1-201ENST00000438030 544 ntBASIC20.79■□□□□ 0.92
MBD3O95983 FAM207BP-201ENST00000447172 505 ntBASIC20.79■□□□□ 0.92
MBD3O95983 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.79■□□□□ 0.92
MBD3O95983 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.79■□□□□ 0.92
MBD3O95983 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
MBD3O95983 AL353708.3-201ENST00000610272 989 ntBASIC20.79■□□□□ 0.92
MBD3O95983 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
MBD3O95983 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.79■□□□□ 0.92
MBD3O95983 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MBD3O95983 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD3O95983 GPAT2P1-201ENST00000444924 1672 ntBASIC20.79■□□□□ 0.92
MBD3O95983 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD3O95983 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
MBD3O95983 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD3O95983 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MBD3O95983 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.78■□□□□ 0.92
MBD3O95983 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3O95983 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.78■□□□□ 0.92
MBD3O95983 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3O95983 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3O95983 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3O95983 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
MBD3O95983 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3O95983 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3O95983 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.78■□□□□ 0.92
MBD3O95983 KRT17P3-201ENST00000420566 1262 ntBASIC20.78■□□□□ 0.92
MBD3O95983 KSR1P1-201ENST00000446298 240 ntBASIC20.78■□□□□ 0.92
MBD3O95983 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3O95983 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.78■□□□□ 0.92
MBD3O95983 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3O95983 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
MBD3O95983 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3O95983 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.78■□□□□ 0.92
MBD3O95983 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3O95983 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3O95983 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3O95983 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.78■□□□□ 0.92
MBD3O95983 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.78■□□□□ 0.92
MBD3O95983 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3O95983 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MBD3O95983 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.77■□□□□ 0.92
MBD3O95983 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD3O95983 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD3O95983 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD3O95983 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
MBD3O95983 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD3O95983 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD3O95983 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.77■□□□□ 0.92
MBD3O95983 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
MBD3O95983 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.77■□□□□ 0.92
MBD3O95983 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.77■□□□□ 0.92
MBD3O95983 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.77■□□□□ 0.92
MBD3O95983 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD3O95983 AC008040.2-201ENST00000461049 708 ntBASIC20.77■□□□□ 0.92
MBD3O95983 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.77■□□□□ 0.92
MBD3O95983 AL023875.1-201ENST00000640777 796 ntBASIC20.77■□□□□ 0.92
MBD3O95983 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.77■□□□□ 0.92
MBD3O95983 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD3O95983 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MBD3O95983 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MBD3O95983 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms