Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GGPS1O95749 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
GGPS1O95749 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GGPS1O95749 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GGPS1O95749 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GGPS1O95749 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.31■□□□□ 0.84
GGPS1O95749 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GGPS1O95749 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GGPS1O95749 TP73-AS1-210ENST00000637775 1455 ntBASIC20.3■□□□□ 0.84
GGPS1O95749 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GGPS1O95749 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.3■□□□□ 0.84
GGPS1O95749 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GGPS1O95749 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GGPS1O95749 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
GGPS1O95749 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
GGPS1O95749 GMCL1P1-201ENST00000463439 1581 ntBASIC20.3■□□□□ 0.84
GGPS1O95749 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GGPS1O95749 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GGPS1O95749 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
GGPS1O95749 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.3■□□□□ 0.84
GGPS1O95749 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GGPS1O95749 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.3■□□□□ 0.84
GGPS1O95749 KRT18P65-201ENST00000439811 1286 ntBASIC20.3■□□□□ 0.84
GGPS1O95749 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GGPS1O95749 AC106795.1-205ENST00000512851 1056 ntBASIC20.3■□□□□ 0.84
GGPS1O95749 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.3■□□□□ 0.84
GGPS1O95749 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GGPS1O95749 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GGPS1O95749 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GGPS1O95749 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GGPS1O95749 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GGPS1O95749 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
GGPS1O95749 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
GGPS1O95749 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GGPS1O95749 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GGPS1O95749 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GGPS1O95749 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
GGPS1O95749 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
GGPS1O95749 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.29■□□□□ 0.84
GGPS1O95749 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GGPS1O95749 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GGPS1O95749 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GGPS1O95749 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
GGPS1O95749 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GGPS1O95749 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.29■□□□□ 0.84
GGPS1O95749 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
GGPS1O95749 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.29■□□□□ 0.84
GGPS1O95749 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
GGPS1O95749 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GGPS1O95749 AP000347.1-202ENST00000435868 847 ntBASIC20.29■□□□□ 0.84
GGPS1O95749 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.29■□□□□ 0.84
GGPS1O95749 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.29■□□□□ 0.84
GGPS1O95749 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.29■□□□□ 0.84
GGPS1O95749 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.29■□□□□ 0.84
GGPS1O95749 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
GGPS1O95749 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.29■□□□□ 0.84
GGPS1O95749 TP73-AS1-207ENST00000624167 988 ntBASIC20.29■□□□□ 0.84
GGPS1O95749 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GGPS1O95749 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
GGPS1O95749 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GGPS1O95749 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
GGPS1O95749 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.29■□□□□ 0.84
GGPS1O95749 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GGPS1O95749 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GGPS1O95749 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GGPS1O95749 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GGPS1O95749 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.29■□□□□ 0.84
GGPS1O95749 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GGPS1O95749 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GGPS1O95749 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GGPS1O95749 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.28■□□□□ 0.84
GGPS1O95749 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GGPS1O95749 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
GGPS1O95749 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GGPS1O95749 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GGPS1O95749 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GGPS1O95749 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GGPS1O95749 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GGPS1O95749 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GGPS1O95749 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.28■□□□□ 0.84
GGPS1O95749 AC132008.2-207ENST00000454517 770 ntBASIC20.28■□□□□ 0.84
GGPS1O95749 AL662844.1-201ENST00000546340 181 ntBASIC20.28■□□□□ 0.84
GGPS1O95749 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.28■□□□□ 0.84
GGPS1O95749 AL138831.2-201ENST00000606564 490 ntBASIC20.28■□□□□ 0.84
GGPS1O95749 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GGPS1O95749 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GGPS1O95749 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.28■□□□□ 0.84
GGPS1O95749 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GGPS1O95749 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.28■□□□□ 0.84
GGPS1O95749 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GGPS1O95749 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GGPS1O95749 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.27■□□□□ 0.84
GGPS1O95749 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
GGPS1O95749 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GGPS1O95749 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.27■□□□□ 0.84
GGPS1O95749 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.27■□□□□ 0.84
GGPS1O95749 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
GGPS1O95749 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GGPS1O95749 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GGPS1O95749 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms