Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SIX6O95475 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SIX6O95475 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SIX6O95475 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SIX6O95475 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SIX6O95475 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
SIX6O95475 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SIX6O95475 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SIX6O95475 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.2■□□□□ 0.02
SIX6O95475 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.2■□□□□ 0.02
SIX6O95475 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.2■□□□□ 0.02
SIX6O95475 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SIX6O95475 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX6O95475 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.2■□□□□ 0.02
SIX6O95475 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SIX6O95475 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX6O95475 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.2■□□□□ 0.02
SIX6O95475 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SIX6O95475 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX6O95475 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX6O95475 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.2■□□□□ 0.02
SIX6O95475 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX6O95475 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.2■□□□□ 0.02
SIX6O95475 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.2■□□□□ 0.02
SIX6O95475 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SIX6O95475 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.2■□□□□ 0.02
SIX6O95475 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.2■□□□□ 0.02
SIX6O95475 AC006557.6-201ENST00000623071 864 ntBASIC15.2■□□□□ 0.02
SIX6O95475 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX6O95475 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SIX6O95475 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SIX6O95475 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX6O95475 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.2■□□□□ 0.02
SIX6O95475 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX6O95475 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX6O95475 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SIX6O95475 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SIX6O95475 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX6O95475 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SIX6O95475 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.19■□□□□ 0.02
SIX6O95475 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX6O95475 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SIX6O95475 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
SIX6O95475 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.19■□□□□ 0.02
SIX6O95475 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX6O95475 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX6O95475 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SIX6O95475 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SIX6O95475 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.19■□□□□ 0.02
SIX6O95475 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
SIX6O95475 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.19■□□□□ 0.02
SIX6O95475 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX6O95475 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.19■□□□□ 0.02
SIX6O95475 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.19■□□□□ 0.02
SIX6O95475 AC005829.2-201ENST00000571422 1056 ntBASIC15.19■□□□□ 0.02
SIX6O95475 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.19■□□□□ 0.02
SIX6O95475 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX6O95475 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX6O95475 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX6O95475 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX6O95475 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX6O95475 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SIX6O95475 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.19■□□□□ 0.02
SIX6O95475 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SIX6O95475 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX6O95475 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIX6O95475 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.19■□□□□ 0.02
SIX6O95475 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SIX6O95475 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIX6O95475 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.18■□□□□ 0.02
SIX6O95475 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIX6O95475 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SIX6O95475 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIX6O95475 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIX6O95475 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIX6O95475 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SIX6O95475 AC079328.2-201ENST00000561241 3354 ntBASIC15.18■□□□□ 0.02
SIX6O95475 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SIX6O95475 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIX6O95475 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SIX6O95475 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIX6O95475 AC092850.2-201ENST00000623821 2697 ntBASIC15.18■□□□□ 0.02
SIX6O95475 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.18■□□□□ 0.02
SIX6O95475 AC073210.2-201ENST00000430369 194 ntBASIC15.18■□□□□ 0.02
SIX6O95475 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.18■□□□□ 0.02
SIX6O95475 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SIX6O95475 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.18■□□□□ 0.02
SIX6O95475 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIX6O95475 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.18■□□□□ 0.02
SIX6O95475 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SIX6O95475 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIX6O95475 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIX6O95475 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SIX6O95475 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.18■□□□□ 0.02
SIX6O95475 TSPY26P-202ENST00000565928 3884 ntBASIC15.18■□□□□ 0.02
SIX6O95475 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIX6O95475 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms