Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH8O95206 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PCDH8O95206 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PCDH8O95206 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH8O95206 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PCDH8O95206 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDH8O95206 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH8O95206 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH8O95206 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDH8O95206 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH8O95206 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH8O95206 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH8O95206 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH8O95206 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDH8O95206 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PCDH8O95206 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH8O95206 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDH8O95206 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDH8O95206 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDH8O95206 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDH8O95206 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDH8O95206 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDH8O95206 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDH8O95206 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDH8O95206 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDH8O95206 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH8O95206 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDH8O95206 AC009154.2-201ENST00000621177 724 ntBASIC18.08■□□□□ 0.48
PCDH8O95206 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH8O95206 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDH8O95206 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH8O95206 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH8O95206 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH8O95206 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDH8O95206 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDH8O95206 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDH8O95206 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH8O95206 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PCDH8O95206 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
PCDH8O95206 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
PCDH8O95206 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDH8O95206 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDH8O95206 KRT16P4-201ENST00000453883 522 ntBASIC18.07■□□□□ 0.48
PCDH8O95206 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDH8O95206 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDH8O95206 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCDH8O95206 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH8O95206 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDH8O95206 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDH8O95206 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH8O95206 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH8O95206 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH8O95206 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH8O95206 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH8O95206 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH8O95206 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDH8O95206 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH8O95206 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH8O95206 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDH8O95206 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH8O95206 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH8O95206 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH8O95206 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH8O95206 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH8O95206 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH8O95206 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH8O95206 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH8O95206 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH8O95206 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDH8O95206 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH8O95206 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDH8O95206 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDH8O95206 ESPNP-201ENST00000270691 2015 ntBASIC18.06■□□□□ 0.48
PCDH8O95206 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PCDH8O95206 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDH8O95206 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH8O95206 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH8O95206 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH8O95206 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PCDH8O95206 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH8O95206 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms