Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.43■□□□□ 0.54
PMPCBO75439 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.43■□□□□ 0.54
PMPCBO75439 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 KRT18P38-201ENST00000449496 1282 ntBASIC18.43■□□□□ 0.54
PMPCBO75439 AC092647.4-201ENST00000457211 535 ntBASIC18.43■□□□□ 0.54
PMPCBO75439 AC092597.1-201ENST00000487352 616 ntBASIC18.43■□□□□ 0.54
PMPCBO75439 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.43■□□□□ 0.54
PMPCBO75439 AL136038.4-201ENST00000603606 1261 ntBASIC18.43■□□□□ 0.54
PMPCBO75439 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.43■□□□□ 0.54
PMPCBO75439 AC138028.4-201ENST00000564984 1845 ntBASIC18.43■□□□□ 0.54
PMPCBO75439 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.43■□□□□ 0.54
PMPCBO75439 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 AL391807.1-203ENST00000604392 2365 ntBASIC18.43■□□□□ 0.54
PMPCBO75439 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PMPCBO75439 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.43■□□□□ 0.54
PMPCBO75439 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PMPCBO75439 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PMPCBO75439 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.42■□□□□ 0.54
PMPCBO75439 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PMPCBO75439 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PMPCBO75439 HOMER2P1-201ENST00000455653 964 ntBASIC18.42■□□□□ 0.54
PMPCBO75439 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.42■□□□□ 0.54
PMPCBO75439 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.42■□□□□ 0.54
PMPCBO75439 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.42■□□□□ 0.54
PMPCBO75439 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PMPCBO75439 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PMPCBO75439 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.42■□□□□ 0.54
PMPCBO75439 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.42■□□□□ 0.54
PMPCBO75439 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PMPCBO75439 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMPCBO75439 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PMPCBO75439 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 AC093010.1-201ENST00000473625 1624 ntBASIC18.41■□□□□ 0.54
PMPCBO75439 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.41■□□□□ 0.54
PMPCBO75439 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
PMPCBO75439 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.41■□□□□ 0.54
PMPCBO75439 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PMPCBO75439 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.41■□□□□ 0.54
PMPCBO75439 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PMPCBO75439 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PMPCBO75439 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.41■□□□□ 0.54
PMPCBO75439 AP000997.3-201ENST00000623333 2250 ntBASIC18.41■□□□□ 0.54
PMPCBO75439 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.41■□□□□ 0.54
PMPCBO75439 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.41■□□□□ 0.54
PMPCBO75439 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.41■□□□□ 0.54
PMPCBO75439 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PMPCBO75439 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PMPCBO75439 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.41■□□□□ 0.54
PMPCBO75439 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.41■□□□□ 0.54
PMPCBO75439 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.41■□□□□ 0.54
PMPCBO75439 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms