Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF254O75437 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF254O75437 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.1■□□□□ 0.17
ZNF254O75437 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF254O75437 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF254O75437 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ZNF254O75437 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF254O75437 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ZNF254O75437 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF254O75437 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
ZNF254O75437 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ZNF254O75437 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF254O75437 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF254O75437 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 SDHAP2-201ENST00000455183 2001 ntBASIC16.09■□□□□ 0.17
ZNF254O75437 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ZNF254O75437 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF254O75437 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ZNF254O75437 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF254O75437 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 PRORSD1P-201ENST00000295112 541 ntBASIC16.09■□□□□ 0.17
ZNF254O75437 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.09■□□□□ 0.17
ZNF254O75437 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF254O75437 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 TSPY17P-201ENST00000450329 467 ntBASIC16.09■□□□□ 0.17
ZNF254O75437 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ZNF254O75437 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF254O75437 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.09■□□□□ 0.17
ZNF254O75437 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.09■□□□□ 0.17
ZNF254O75437 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF254O75437 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.09■□□□□ 0.17
ZNF254O75437 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.09■□□□□ 0.17
ZNF254O75437 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ZNF254O75437 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
ZNF254O75437 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.09■□□□□ 0.17
ZNF254O75437 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.09■□□□□ 0.17
ZNF254O75437 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF254O75437 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.08■□□□□ 0.17
ZNF254O75437 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF254O75437 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.08■□□□□ 0.17
ZNF254O75437 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF254O75437 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF254O75437 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF254O75437 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF254O75437 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF254O75437 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF254O75437 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
ZNF254O75437 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF254O75437 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF254O75437 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF254O75437 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF254O75437 TSPY20P-201ENST00000450910 630 ntBASIC16.08■□□□□ 0.16
ZNF254O75437 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF254O75437 WWOX-216ENST00000569818 525 ntBASIC16.08■□□□□ 0.16
ZNF254O75437 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF254O75437 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF254O75437 AC008894.3-201ENST00000624324 3103 ntBASIC16.08■□□□□ 0.16
ZNF254O75437 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF254O75437 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF254O75437 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF254O75437 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF254O75437 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.16
ZNF254O75437 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.08■□□□□ 0.16
ZNF254O75437 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ZNF254O75437 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF254O75437 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF254O75437 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF254O75437 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF254O75437 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ZNF254O75437 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF254O75437 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF254O75437 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF254O75437 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ZNF254O75437 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ZNF254O75437 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF254O75437 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF254O75437 KRT18P23-201ENST00000435622 1283 ntBASIC16.07■□□□□ 0.16
ZNF254O75437 GCSHP5-201ENST00000443090 522 ntBASIC16.07■□□□□ 0.16
ZNF254O75437 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms