Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
PRAMEF4O60810 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
PRAMEF4O60810 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.45■□□□□ 0.38
PRAMEF4O60810 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRAMEF4O60810 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.44■□□□□ 0.38
PRAMEF4O60810 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF4O60810 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.44■□□□□ 0.38
PRAMEF4O60810 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF4O60810 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.44■□□□□ 0.38
PRAMEF4O60810 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF4O60810 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF4O60810 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF4O60810 KRT18P55-202ENST00000578578 1546 ntBASIC17.44■□□□□ 0.38
PRAMEF4O60810 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF4O60810 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF4O60810 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF4O60810 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.44■□□□□ 0.38
PRAMEF4O60810 SPDYE13P-201ENST00000445314 798 ntBASIC17.44■□□□□ 0.38
PRAMEF4O60810 AL359075.1-203ENST00000462729 1002 ntBASIC17.44■□□□□ 0.38
PRAMEF4O60810 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.44■□□□□ 0.38
PRAMEF4O60810 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.44■□□□□ 0.38
PRAMEF4O60810 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.44■□□□□ 0.38
PRAMEF4O60810 AC024563.2-201ENST00000603282 481 ntBASIC17.44■□□□□ 0.38
PRAMEF4O60810 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF4O60810 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF4O60810 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PRAMEF4O60810 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.44■□□□□ 0.38
PRAMEF4O60810 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PRAMEF4O60810 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF4O60810 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF4O60810 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF4O60810 AC006116.8-202ENST00000587620 1550 ntBASIC17.44■□□□□ 0.38
PRAMEF4O60810 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF4O60810 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF4O60810 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PRAMEF4O60810 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PRAMEF4O60810 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEF4O60810 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
PRAMEF4O60810 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEF4O60810 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEF4O60810 HBZP1-201ENST00000354915 429 ntBASIC17.43■□□□□ 0.38
PRAMEF4O60810 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.43■□□□□ 0.38
PRAMEF4O60810 AC113404.2-201ENST00000507884 177 ntBASIC17.43■□□□□ 0.38
PRAMEF4O60810 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PRAMEF4O60810 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PRAMEF4O60810 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEF4O60810 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PRAMEF4O60810 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PRAMEF4O60810 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PRAMEF4O60810 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PRAMEF4O60810 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEF4O60810 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEF4O60810 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF4O60810 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEF4O60810 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF4O60810 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF4O60810 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF4O60810 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.42■□□□□ 0.38
PRAMEF4O60810 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF4O60810 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF4O60810 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF4O60810 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEF4O60810 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF4O60810 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF4O60810 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.42■□□□□ 0.38
PRAMEF4O60810 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEF4O60810 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.42■□□□□ 0.38
PRAMEF4O60810 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF4O60810 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEF4O60810 AC063952.2-201ENST00000498792 1227 ntBASIC17.42■□□□□ 0.38
PRAMEF4O60810 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.42■□□□□ 0.38
PRAMEF4O60810 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEF4O60810 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF4O60810 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF4O60810 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEF4O60810 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PRAMEF4O60810 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEF4O60810 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms