Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTNND1O60716 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.12■□□□□ 0.97
CTNND1O60716 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.12■□□□□ 0.97
CTNND1O60716 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.12■□□□□ 0.97
CTNND1O60716 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTNND1O60716 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.12■□□□□ 0.97
CTNND1O60716 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTNND1O60716 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTNND1O60716 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.12■□□□□ 0.97
CTNND1O60716 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTNND1O60716 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CTNND1O60716 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTNND1O60716 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTNND1O60716 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.11■□□□□ 0.97
CTNND1O60716 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTNND1O60716 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.11■□□□□ 0.97
CTNND1O60716 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CTNND1O60716 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.11■□□□□ 0.97
CTNND1O60716 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.11■□□□□ 0.97
CTNND1O60716 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.11■□□□□ 0.97
CTNND1O60716 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.11■□□□□ 0.97
CTNND1O60716 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CTNND1O60716 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.11■□□□□ 0.97
CTNND1O60716 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CTNND1O60716 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTNND1O60716 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTNND1O60716 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.11■□□□□ 0.97
CTNND1O60716 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTNND1O60716 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTNND1O60716 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTNND1O60716 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.1■□□□□ 0.97
CTNND1O60716 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.1■□□□□ 0.97
CTNND1O60716 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.1■□□□□ 0.97
CTNND1O60716 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTNND1O60716 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTNND1O60716 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CTNND1O60716 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.1■□□□□ 0.97
CTNND1O60716 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTNND1O60716 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTNND1O60716 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTNND1O60716 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.1■□□□□ 0.97
CTNND1O60716 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.1■□□□□ 0.97
CTNND1O60716 AC092865.5-201ENST00000545435 363 ntBASIC21.1■□□□□ 0.97
CTNND1O60716 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CTNND1O60716 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.1■□□□□ 0.97
CTNND1O60716 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.1■□□□□ 0.97
CTNND1O60716 AL139288.1-201ENST00000623748 933 ntBASIC21.1■□□□□ 0.97
CTNND1O60716 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.1■□□□□ 0.97
CTNND1O60716 HLA-J-201ENST00000462773 1622 ntBASIC21.1■□□□□ 0.97
CTNND1O60716 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.1■□□□□ 0.97
CTNND1O60716 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.1■□□□□ 0.97
CTNND1O60716 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTNND1O60716 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CTNND1O60716 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTNND1O60716 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTNND1O60716 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
CTNND1O60716 AC116562.4-201ENST00000641316 2276 ntBASIC21.09■□□□□ 0.97
CTNND1O60716 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.09■□□□□ 0.97
CTNND1O60716 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.09■□□□□ 0.97
CTNND1O60716 AC097374.2-201ENST00000618617 1306 ntBASIC21.09■□□□□ 0.97
CTNND1O60716 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.09■□□□□ 0.97
CTNND1O60716 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.09■□□□□ 0.97
CTNND1O60716 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTNND1O60716 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.09■□□□□ 0.97
CTNND1O60716 MIR940-201ENST00000401276 94 ntBASIC21.09■□□□□ 0.97
CTNND1O60716 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.09■□□□□ 0.97
CTNND1O60716 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.09■□□□□ 0.97
CTNND1O60716 OR7E14P-202ENST00000530490 1290 ntBASIC21.09■□□□□ 0.97
CTNND1O60716 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.09■□□□□ 0.97
CTNND1O60716 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.09■□□□□ 0.97
CTNND1O60716 AC025062.2-201ENST00000605477 670 ntBASIC21.09■□□□□ 0.97
CTNND1O60716 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTNND1O60716 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTNND1O60716 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTNND1O60716 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTNND1O60716 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTNND1O60716 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTNND1O60716 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CTNND1O60716 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTNND1O60716 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTNND1O60716 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTNND1O60716 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.08■□□□□ 0.97
CTNND1O60716 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CTNND1O60716 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
CTNND1O60716 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CTNND1O60716 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CTNND1O60716 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CTNND1O60716 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTNND1O60716 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CTNND1O60716 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CTNND1O60716 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTNND1O60716 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTNND1O60716 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.08■□□□□ 0.97
CTNND1O60716 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.08■□□□□ 0.97
CTNND1O60716 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTNND1O60716 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.08■□□□□ 0.97
CTNND1O60716 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.08■□□□□ 0.96
CTNND1O60716 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CTNND1O60716 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.08■□□□□ 0.96
CTNND1O60716 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms