Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRICKLE3O43900 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.38■□□□□ 0.37
PRICKLE3O43900 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.38■□□□□ 0.37
PRICKLE3O43900 TPSP2-201ENST00000561760 610 ntBASIC17.38■□□□□ 0.37
PRICKLE3O43900 AP002414.4-201ENST00000589764 1148 ntBASIC17.38■□□□□ 0.37
PRICKLE3O43900 IGHV3-41-201ENST00000613121 348 ntBASIC17.38■□□□□ 0.37
PRICKLE3O43900 AC124864.1-201ENST00000623408 392 ntBASIC17.38■□□□□ 0.37
PRICKLE3O43900 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRICKLE3O43900 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.38■□□□□ 0.37
PRICKLE3O43900 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRICKLE3O43900 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRICKLE3O43900 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.38■□□□□ 0.37
PRICKLE3O43900 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRICKLE3O43900 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.38■□□□□ 0.37
PRICKLE3O43900 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRICKLE3O43900 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRICKLE3O43900 REXO1L9P-201ENST00000604264 2108 ntBASIC17.38■□□□□ 0.37
PRICKLE3O43900 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PRICKLE3O43900 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PRICKLE3O43900 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.37■□□□□ 0.37
PRICKLE3O43900 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PRICKLE3O43900 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.37■□□□□ 0.37
PRICKLE3O43900 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.37■□□□□ 0.37
PRICKLE3O43900 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.37■□□□□ 0.37
PRICKLE3O43900 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.37■□□□□ 0.37
PRICKLE3O43900 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
PRICKLE3O43900 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.37■□□□□ 0.37
PRICKLE3O43900 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.37■□□□□ 0.37
PRICKLE3O43900 AC093458.2-201ENST00000623150 629 ntBASIC17.37■□□□□ 0.37
PRICKLE3O43900 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.37■□□□□ 0.37
PRICKLE3O43900 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PRICKLE3O43900 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.37■□□□□ 0.37
PRICKLE3O43900 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PRICKLE3O43900 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRICKLE3O43900 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.37■□□□□ 0.37
PRICKLE3O43900 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.36■□□□□ 0.37
PRICKLE3O43900 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PRICKLE3O43900 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PRICKLE3O43900 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.36■□□□□ 0.37
PRICKLE3O43900 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 MTCL1P1-201ENST00000446207 792 ntBASIC17.36■□□□□ 0.37
PRICKLE3O43900 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.36■□□□□ 0.37
PRICKLE3O43900 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.36■□□□□ 0.37
PRICKLE3O43900 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.36■□□□□ 0.37
PRICKLE3O43900 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
PRICKLE3O43900 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PRICKLE3O43900 KRT18P1-202ENST00000452408 1331 ntBASIC17.36■□□□□ 0.37
PRICKLE3O43900 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.36■□□□□ 0.37
PRICKLE3O43900 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.36■□□□□ 0.37
PRICKLE3O43900 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.36■□□□□ 0.37
PRICKLE3O43900 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRICKLE3O43900 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PRICKLE3O43900 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRICKLE3O43900 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms