Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SLC28A2O43868 AL671883.3-201ENST00000603274 991 ntBASIC17.49■□□□□ 0.39
SLC28A2O43868 AL121772.3-201ENST00000610840 674 ntBASIC17.49■□□□□ 0.39
SLC28A2O43868 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 BICD1-207ENST00000551848 1962 ntBASIC17.49■□□□□ 0.39
SLC28A2O43868 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SLC28A2O43868 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 KRT8P32-201ENST00000512863 1461 ntBASIC17.49■□□□□ 0.39
SLC28A2O43868 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A2O43868 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A2O43868 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A2O43868 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A2O43868 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLC28A2O43868 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
SLC28A2O43868 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A2O43868 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A2O43868 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A2O43868 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SLC28A2O43868 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A2O43868 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
SLC28A2O43868 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
SLC28A2O43868 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A2O43868 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC28A2O43868 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC28A2O43868 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SLC28A2O43868 AC106795.1-205ENST00000512851 1056 ntBASIC17.48■□□□□ 0.39
SLC28A2O43868 AP002469.2-201ENST00000531724 424 ntBASIC17.48■□□□□ 0.39
SLC28A2O43868 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC28A2O43868 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC28A2O43868 AC011498.5-201ENST00000592027 486 ntBASIC17.48■□□□□ 0.39
SLC28A2O43868 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.48■□□□□ 0.39
SLC28A2O43868 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC28A2O43868 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
SLC28A2O43868 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC28A2O43868 AC016734.2-201ENST00000624325 1377 ntBASIC17.48■□□□□ 0.39
SLC28A2O43868 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A2O43868 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A2O43868 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A2O43868 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC28A2O43868 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A2O43868 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A2O43868 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A2O43868 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A2O43868 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A2O43868 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A2O43868 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A2O43868 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A2O43868 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A2O43868 AC073592.3-201ENST00000625118 1834 ntBASIC17.47■□□□□ 0.39
SLC28A2O43868 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A2O43868 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC28A2O43868 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A2O43868 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SLC28A2O43868 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A2O43868 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A2O43868 HBZP1-201ENST00000354915 429 ntBASIC17.47■□□□□ 0.39
SLC28A2O43868 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A2O43868 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SLC28A2O43868 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SLC28A2O43868 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
SLC28A2O43868 FAM220CP-201ENST00000395253 831 ntBASIC17.47■□□□□ 0.39
SLC28A2O43868 TSPY19P-201ENST00000418461 509 ntBASIC17.47■□□□□ 0.39
SLC28A2O43868 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A2O43868 TSPY18P-201ENST00000441642 509 ntBASIC17.47■□□□□ 0.39
SLC28A2O43868 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A2O43868 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC28A2O43868 AC092865.5-201ENST00000545435 363 ntBASIC17.47■□□□□ 0.39
SLC28A2O43868 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A2O43868 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SLC28A2O43868 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A2O43868 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A2O43868 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A2O43868 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A2O43868 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A2O43868 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A2O43868 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC28A2O43868 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC28A2O43868 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC28A2O43868 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC28A2O43868 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SLC28A2O43868 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
SLC28A2O43868 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 AL499627.1-201ENST00000569373 2188 ntBASIC17.46■□□□□ 0.39
SLC28A2O43868 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 AC018470.1-201ENST00000624790 3129 ntBASIC17.46■□□□□ 0.39
SLC28A2O43868 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC28A2O43868 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC28A2O43868 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SLC28A2O43868 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms