Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RRP8O43159 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RRP8O43159 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
RRP8O43159 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RRP8O43159 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17■□□□□ 0.31
RRP8O43159 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
RRP8O43159 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.99■□□□□ 0.31
RRP8O43159 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.99■□□□□ 0.31
RRP8O43159 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.99■□□□□ 0.31
RRP8O43159 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.99■□□□□ 0.31
RRP8O43159 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.99■□□□□ 0.31
RRP8O43159 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RRP8O43159 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.99■□□□□ 0.31
RRP8O43159 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.99■□□□□ 0.31
RRP8O43159 AL645939.2-201ENST00000427340 991 ntBASIC16.99■□□□□ 0.31
RRP8O43159 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.99■□□□□ 0.31
RRP8O43159 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RRP8O43159 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.99■□□□□ 0.31
RRP8O43159 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
RRP8O43159 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.99■□□□□ 0.31
RRP8O43159 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.99■□□□□ 0.31
RRP8O43159 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.99■□□□□ 0.31
RRP8O43159 AC239800.4-201ENST00000603712 296 ntBASIC16.99■□□□□ 0.31
RRP8O43159 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.99■□□□□ 0.31
RRP8O43159 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.99■□□□□ 0.31
RRP8O43159 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.99■□□□□ 0.31
RRP8O43159 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RRP8O43159 FEM1AP3-201ENST00000403722 1741 ntBASIC16.99■□□□□ 0.31
RRP8O43159 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RRP8O43159 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RRP8O43159 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.98■□□□□ 0.31
RRP8O43159 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.98■□□□□ 0.31
RRP8O43159 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RRP8O43159 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RRP8O43159 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RRP8O43159 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RRP8O43159 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RRP8O43159 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.98■□□□□ 0.31
RRP8O43159 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.98■□□□□ 0.31
RRP8O43159 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RRP8O43159 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.98■□□□□ 0.31
RRP8O43159 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.98■□□□□ 0.31
RRP8O43159 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.98■□□□□ 0.31
RRP8O43159 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.98■□□□□ 0.31
RRP8O43159 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.98■□□□□ 0.31
RRP8O43159 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.98■□□□□ 0.31
RRP8O43159 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.98■□□□□ 0.31
RRP8O43159 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RRP8O43159 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.98■□□□□ 0.31
RRP8O43159 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.98■□□□□ 0.31
RRP8O43159 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.98■□□□□ 0.31
RRP8O43159 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RRP8O43159 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RRP8O43159 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RRP8O43159 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RRP8O43159 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
RRP8O43159 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.98■□□□□ 0.31
RRP8O43159 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RRP8O43159 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RRP8O43159 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RRP8O43159 AC087289.5-201ENST00000586076 3175 ntBASIC16.97■□□□□ 0.31
RRP8O43159 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.97■□□□□ 0.31
RRP8O43159 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.97■□□□□ 0.31
RRP8O43159 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RRP8O43159 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RRP8O43159 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RRP8O43159 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
RRP8O43159 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.97■□□□□ 0.31
RRP8O43159 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RRP8O43159 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RRP8O43159 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RRP8O43159 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RRP8O43159 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.97■□□□□ 0.31
RRP8O43159 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.97■□□□□ 0.31
RRP8O43159 AC254562.1-201ENST00000417586 456 ntBASIC16.97■□□□□ 0.31
RRP8O43159 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.97■□□□□ 0.31
RRP8O43159 LAGE3P1-201ENST00000425356 484 ntBASIC16.97■□□□□ 0.31
RRP8O43159 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RRP8O43159 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.97■□□□□ 0.31
RRP8O43159 AL138831.2-201ENST00000606564 490 ntBASIC16.97■□□□□ 0.31
RRP8O43159 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RRP8O43159 AC005593.1-201ENST00000624894 515 ntBASIC16.97■□□□□ 0.31
RRP8O43159 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms