Protein–RNA interactions for Protein: O15258

RER1, Protein RER1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RER1O15258 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
RER1O15258 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RER1O15258 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 AC134043.2-201ENST00000624206 2238 ntBASIC15.94■□□□□ 0.14
RER1O15258 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.94■□□□□ 0.14
RER1O15258 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.94■□□□□ 0.14
RER1O15258 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.94■□□□□ 0.14
RER1O15258 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.94■□□□□ 0.14
RER1O15258 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RER1O15258 AC140113.3-201ENST00000605663 199 ntBASIC15.94■□□□□ 0.14
RER1O15258 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.94■□□□□ 0.14
RER1O15258 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.94■□□□□ 0.14
RER1O15258 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.94■□□□□ 0.14
RER1O15258 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.94■□□□□ 0.14
RER1O15258 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RER1O15258 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RER1O15258 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.93■□□□□ 0.14
RER1O15258 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.93■□□□□ 0.14
RER1O15258 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RER1O15258 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RER1O15258 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.93■□□□□ 0.14
RER1O15258 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.93■□□□□ 0.14
RER1O15258 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.93■□□□□ 0.14
RER1O15258 AC113347.1-201ENST00000413321 391 ntBASIC15.93■□□□□ 0.14
RER1O15258 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.93■□□□□ 0.14
RER1O15258 AL137013.1-201ENST00000432946 1228 ntBASIC15.93■□□□□ 0.14
RER1O15258 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.93■□□□□ 0.14
RER1O15258 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
RER1O15258 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.93■□□□□ 0.14
RER1O15258 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.93■□□□□ 0.14
RER1O15258 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
RER1O15258 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
RER1O15258 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RER1O15258 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RER1O15258 FZD10-202ENST00000539839 3282 ntBASIC15.93■□□□□ 0.14
RER1O15258 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RER1O15258 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RER1O15258 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RER1O15258 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RER1O15258 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.93■□□□□ 0.14
RER1O15258 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RER1O15258 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.92■□□□□ 0.14
RER1O15258 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.92■□□□□ 0.14
RER1O15258 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RER1O15258 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.92■□□□□ 0.14
RER1O15258 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RER1O15258 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RER1O15258 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.92■□□□□ 0.14
RER1O15258 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RER1O15258 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RER1O15258 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.92■□□□□ 0.14
RER1O15258 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RER1O15258 TERF1P1-201ENST00000311003 1181 ntBASIC15.92■□□□□ 0.14
RER1O15258 PVRIG2P-201ENST00000435460 978 ntBASIC15.92■□□□□ 0.14
RER1O15258 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.92■□□□□ 0.14
RER1O15258 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RER1O15258 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
RER1O15258 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.92■□□□□ 0.14
RER1O15258 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.92■□□□□ 0.14
RER1O15258 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.92■□□□□ 0.14
RER1O15258 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.92■□□□□ 0.14
RER1O15258 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.92■□□□□ 0.14
RER1O15258 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RER1O15258 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms