Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EIF3FO00303 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EIF3FO00303 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
EIF3FO00303 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.74■□□□□ 0.43
EIF3FO00303 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EIF3FO00303 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EIF3FO00303 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
EIF3FO00303 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EIF3FO00303 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EIF3FO00303 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.73■□□□□ 0.43
EIF3FO00303 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
EIF3FO00303 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.73■□□□□ 0.43
EIF3FO00303 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EIF3FO00303 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.73■□□□□ 0.43
EIF3FO00303 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EIF3FO00303 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.73■□□□□ 0.43
EIF3FO00303 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
EIF3FO00303 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
EIF3FO00303 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.73■□□□□ 0.43
EIF3FO00303 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EIF3FO00303 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.73■□□□□ 0.43
EIF3FO00303 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.73■□□□□ 0.43
EIF3FO00303 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.73■□□□□ 0.43
EIF3FO00303 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EIF3FO00303 HBZP1-201ENST00000354915 429 ntBASIC17.73■□□□□ 0.43
EIF3FO00303 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EIF3FO00303 MIR662-201ENST00000384847 95 ntBASIC17.73■□□□□ 0.43
EIF3FO00303 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EIF3FO00303 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.73■□□□□ 0.43
EIF3FO00303 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EIF3FO00303 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.73■□□□□ 0.43
EIF3FO00303 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.73■□□□□ 0.43
EIF3FO00303 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EIF3FO00303 KRT18P65-201ENST00000439811 1286 ntBASIC17.73■□□□□ 0.43
EIF3FO00303 AC092647.4-201ENST00000457211 535 ntBASIC17.73■□□□□ 0.43
EIF3FO00303 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.73■□□□□ 0.43
EIF3FO00303 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EIF3FO00303 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.73■□□□□ 0.43
EIF3FO00303 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.73■□□□□ 0.43
EIF3FO00303 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.73■□□□□ 0.43
EIF3FO00303 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.73■□□□□ 0.43
EIF3FO00303 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.73■□□□□ 0.43
EIF3FO00303 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EIF3FO00303 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.73■□□□□ 0.43
EIF3FO00303 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EIF3FO00303 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EIF3FO00303 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EIF3FO00303 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.73■□□□□ 0.43
EIF3FO00303 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.73■□□□□ 0.43
EIF3FO00303 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
EIF3FO00303 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EIF3FO00303 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.73■□□□□ 0.43
EIF3FO00303 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.72■□□□□ 0.43
EIF3FO00303 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 AP000997.3-201ENST00000623333 2250 ntBASIC17.72■□□□□ 0.43
EIF3FO00303 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.72■□□□□ 0.43
EIF3FO00303 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
EIF3FO00303 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 RCN1P1-201ENST00000400413 996 ntBASIC17.72■□□□□ 0.43
EIF3FO00303 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.72■□□□□ 0.43
EIF3FO00303 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
EIF3FO00303 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.72■□□□□ 0.43
EIF3FO00303 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.72■□□□□ 0.43
EIF3FO00303 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EIF3FO00303 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.71■□□□□ 0.43
EIF3FO00303 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.71■□□□□ 0.43
EIF3FO00303 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EIF3FO00303 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.71■□□□□ 0.43
EIF3FO00303 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.71■□□□□ 0.43
EIF3FO00303 AC104076.2-201ENST00000448912 469 ntBASIC17.71■□□□□ 0.43
EIF3FO00303 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.71■□□□□ 0.43
EIF3FO00303 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.71■□□□□ 0.43
EIF3FO00303 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms