Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.78■■□□□ 1.08
NFKBIEO00221 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.78■■□□□ 1.08
NFKBIEO00221 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NFKBIEO00221 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NFKBIEO00221 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
NFKBIEO00221 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NFKBIEO00221 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.77■■□□□ 1.08
NFKBIEO00221 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
NFKBIEO00221 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NFKBIEO00221 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NFKBIEO00221 KRT8P47-201ENST00000604727 1398 ntBASIC21.77■■□□□ 1.08
NFKBIEO00221 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.77■■□□□ 1.08
NFKBIEO00221 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NFKBIEO00221 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NFKBIEO00221 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.77■■□□□ 1.08
NFKBIEO00221 RPS15P9-201ENST00000494093 319 ntBASIC21.77■■□□□ 1.08
NFKBIEO00221 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
NFKBIEO00221 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.77■■□□□ 1.08
NFKBIEO00221 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.77■■□□□ 1.08
NFKBIEO00221 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NFKBIEO00221 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NFKBIEO00221 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NFKBIEO00221 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NFKBIEO00221 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.77■■□□□ 1.08
NFKBIEO00221 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.07
NFKBIEO00221 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.77■■□□□ 1.07
NFKBIEO00221 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
NFKBIEO00221 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.76■■□□□ 1.07
NFKBIEO00221 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
NFKBIEO00221 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NFKBIEO00221 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NFKBIEO00221 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NFKBIEO00221 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NFKBIEO00221 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.76■■□□□ 1.07
NFKBIEO00221 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
NFKBIEO00221 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.76■■□□□ 1.07
NFKBIEO00221 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.76■■□□□ 1.07
NFKBIEO00221 AC096633.1-201ENST00000422446 749 ntBASIC21.76■■□□□ 1.07
NFKBIEO00221 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NFKBIEO00221 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NFKBIEO00221 HLA-J-202ENST00000469281 1241 ntBASIC21.76■■□□□ 1.07
NFKBIEO00221 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
NFKBIEO00221 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NFKBIEO00221 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.76■■□□□ 1.07
NFKBIEO00221 AC138761.1-201ENST00000584393 385 ntBASIC21.76■■□□□ 1.07
NFKBIEO00221 AC005498.2-205ENST00000593218 784 ntBASIC21.76■■□□□ 1.07
NFKBIEO00221 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.76■■□□□ 1.07
NFKBIEO00221 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.76■■□□□ 1.07
NFKBIEO00221 AC073592.5-201ENST00000624854 528 ntBASIC21.76■■□□□ 1.07
NFKBIEO00221 AC010507.1-201ENST00000633895 436 ntBASIC21.76■■□□□ 1.07
NFKBIEO00221 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.76■■□□□ 1.07
NFKBIEO00221 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.76■■□□□ 1.07
NFKBIEO00221 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.76■■□□□ 1.07
NFKBIEO00221 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NFKBIEO00221 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NFKBIEO00221 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NFKBIEO00221 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NFKBIEO00221 AL499627.1-201ENST00000569373 2188 ntBASIC21.75■■□□□ 1.07
NFKBIEO00221 AL032819.2-201ENST00000624543 2162 ntBASIC21.75■■□□□ 1.07
NFKBIEO00221 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
NFKBIEO00221 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NFKBIEO00221 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NFKBIEO00221 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.75■■□□□ 1.07
NFKBIEO00221 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NFKBIEO00221 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NFKBIEO00221 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NFKBIEO00221 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NFKBIEO00221 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.75■■□□□ 1.07
NFKBIEO00221 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NFKBIEO00221 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NFKBIEO00221 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.75■■□□□ 1.07
NFKBIEO00221 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.75■■□□□ 1.07
NFKBIEO00221 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.75■■□□□ 1.07
NFKBIEO00221 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.75■■□□□ 1.07
NFKBIEO00221 AC004877.2-201ENST00000623941 599 ntBASIC21.75■■□□□ 1.07
NFKBIEO00221 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NFKBIEO00221 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.75■■□□□ 1.07
NFKBIEO00221 AL158211.5-201ENST00000623583 2518 ntBASIC21.75■■□□□ 1.07
NFKBIEO00221 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NFKBIEO00221 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NFKBIEO00221 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NFKBIEO00221 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NFKBIEO00221 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NFKBIEO00221 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NFKBIEO00221 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
NFKBIEO00221 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NFKBIEO00221 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
NFKBIEO00221 AC092474.2-201ENST00000424288 719 ntBASIC21.74■■□□□ 1.07
NFKBIEO00221 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NFKBIEO00221 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NFKBIEO00221 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
NFKBIEO00221 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.74■■□□□ 1.07
NFKBIEO00221 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.74■■□□□ 1.07
NFKBIEO00221 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NFKBIEO00221 AL513210.1-201ENST00000629608 234 ntBASIC21.74■■□□□ 1.07
NFKBIEO00221 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.74■■□□□ 1.07
NFKBIEO00221 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.74■■□□□ 1.07
NFKBIEO00221 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NFKBIEO00221 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NFKBIEO00221 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms