Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
DDX39AO00148 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.36■□□□□ 0.85
DDX39AO00148 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.36■□□□□ 0.85
DDX39AO00148 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.36■□□□□ 0.85
DDX39AO00148 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 KRT17P6-201ENST00000453795 1220 ntBASIC20.36■□□□□ 0.85
DDX39AO00148 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.36■□□□□ 0.85
DDX39AO00148 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.36■□□□□ 0.85
DDX39AO00148 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.36■□□□□ 0.85
DDX39AO00148 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 AC012615.1-201ENST00000565797 1299 ntBASIC20.36■□□□□ 0.85
DDX39AO00148 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.36■□□□□ 0.85
DDX39AO00148 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.36■□□□□ 0.85
DDX39AO00148 AC099336.1-202ENST00000602961 463 ntBASIC20.36■□□□□ 0.85
DDX39AO00148 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.36■□□□□ 0.85
DDX39AO00148 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.36■□□□□ 0.85
DDX39AO00148 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.36■□□□□ 0.85
DDX39AO00148 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.36■□□□□ 0.85
DDX39AO00148 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
DDX39AO00148 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX39AO00148 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX39AO00148 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX39AO00148 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX39AO00148 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
DDX39AO00148 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX39AO00148 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX39AO00148 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX39AO00148 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX39AO00148 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
DDX39AO00148 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX39AO00148 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX39AO00148 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX39AO00148 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX39AO00148 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX39AO00148 AC068472.1-201ENST00000474589 881 ntBASIC20.35■□□□□ 0.85
DDX39AO00148 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.35■□□□□ 0.85
DDX39AO00148 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.35■□□□□ 0.85
DDX39AO00148 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.35■□□□□ 0.85
DDX39AO00148 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.35■□□□□ 0.85
DDX39AO00148 AL732292.2-201ENST00000609649 430 ntBASIC20.35■□□□□ 0.85
DDX39AO00148 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
DDX39AO00148 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.35■□□□□ 0.85
DDX39AO00148 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX39AO00148 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
DDX39AO00148 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
DDX39AO00148 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.35■□□□□ 0.85
DDX39AO00148 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
DDX39AO00148 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.35■□□□□ 0.85
DDX39AO00148 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.34■□□□□ 0.85
DDX39AO00148 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.34■□□□□ 0.85
DDX39AO00148 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.34■□□□□ 0.85
DDX39AO00148 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX39AO00148 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX39AO00148 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX39AO00148 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX39AO00148 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX39AO00148 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX39AO00148 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX39AO00148 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
DDX39AO00148 VENTXP7-201ENST00000475503 772 ntBASIC20.34■□□□□ 0.85
DDX39AO00148 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.34■□□□□ 0.85
DDX39AO00148 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.34■□□□□ 0.85
DDX39AO00148 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX39AO00148 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.34■□□□□ 0.85
DDX39AO00148 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
DDX39AO00148 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX39AO00148 AC132938.6-201ENST00000623828 1655 ntBASIC20.34■□□□□ 0.85
DDX39AO00148 AC135776.1-201ENST00000319817 2481 ntBASIC20.34■□□□□ 0.85
DDX39AO00148 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX39AO00148 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX39AO00148 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX39AO00148 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
DDX39AO00148 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX39AO00148 AC009113.1-201ENST00000570267 2443 ntBASIC20.34■□□□□ 0.85
DDX39AO00148 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
DDX39AO00148 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.34■□□□□ 0.85
DDX39AO00148 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.33■□□□□ 0.85
DDX39AO00148 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX39AO00148 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX39AO00148 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX39AO00148 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX39AO00148 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
DDX39AO00148 NSUN5P1-202ENST00000421140 1535 ntBASIC20.33■□□□□ 0.85
DDX39AO00148 NSUN5P2-203ENST00000457352 1529 ntBASIC20.33■□□□□ 0.85
DDX39AO00148 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms