Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.28□□□□□ -0.28
NACAE9PAV3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NACAE9PAV3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NACAE9PAV3 ESPNP-201ENST00000270691 2015 ntBASIC13.28□□□□□ -0.28
NACAE9PAV3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NACAE9PAV3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
NACAE9PAV3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.28□□□□□ -0.28
NACAE9PAV3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NACAE9PAV3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NACAE9PAV3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NACAE9PAV3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NACAE9PAV3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NACAE9PAV3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NACAE9PAV3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NACAE9PAV3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NACAE9PAV3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NACAE9PAV3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NACAE9PAV3 GPAT2P1-201ENST00000444924 1672 ntBASIC13.28□□□□□ -0.28
NACAE9PAV3 CRYGFP-201ENST00000418459 633 ntBASIC13.28□□□□□ -0.28
NACAE9PAV3 MFAP1P1-201ENST00000442257 1255 ntBASIC13.28□□□□□ -0.28
NACAE9PAV3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.28□□□□□ -0.28
NACAE9PAV3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.28□□□□□ -0.28
NACAE9PAV3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.28□□□□□ -0.28
NACAE9PAV3 AP005242.2-201ENST00000580065 1175 ntBASIC13.28□□□□□ -0.28
NACAE9PAV3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.28□□□□□ -0.28
NACAE9PAV3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.28□□□□□ -0.28
NACAE9PAV3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.28□□□□□ -0.28
NACAE9PAV3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NACAE9PAV3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.28□□□□□ -0.28
NACAE9PAV3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NACAE9PAV3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NACAE9PAV3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NACAE9PAV3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
NACAE9PAV3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.28□□□□□ -0.28
NACAE9PAV3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NACAE9PAV3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.27□□□□□ -0.28
NACAE9PAV3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NACAE9PAV3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
NACAE9PAV3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.27□□□□□ -0.28
NACAE9PAV3 AC007663.1-201ENST00000438948 1240 ntBASIC13.27□□□□□ -0.28
NACAE9PAV3 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.27□□□□□ -0.28
NACAE9PAV3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.27□□□□□ -0.28
NACAE9PAV3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
NACAE9PAV3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NACAE9PAV3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
NACAE9PAV3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NACAE9PAV3 NTF6B-201ENST00000591913 560 ntBASIC13.27□□□□□ -0.28
NACAE9PAV3 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.27□□□□□ -0.28
NACAE9PAV3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
NACAE9PAV3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NACAE9PAV3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NACAE9PAV3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NACAE9PAV3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
NACAE9PAV3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.27□□□□□ -0.29
NACAE9PAV3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 CA15P1-201ENST00000481698 905 ntBASIC13.27□□□□□ -0.29
NACAE9PAV3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NACAE9PAV3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NACAE9PAV3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NACAE9PAV3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NACAE9PAV3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NACAE9PAV3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NACAE9PAV3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.26□□□□□ -0.29
NACAE9PAV3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NACAE9PAV3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NACAE9PAV3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NACAE9PAV3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NACAE9PAV3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NACAE9PAV3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.26□□□□□ -0.29
NACAE9PAV3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.26□□□□□ -0.29
NACAE9PAV3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NACAE9PAV3 AC008040.2-201ENST00000461049 708 ntBASIC13.26□□□□□ -0.29
NACAE9PAV3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.26□□□□□ -0.29
NACAE9PAV3 DUX4L26-201ENST00000489078 1255 ntBASIC13.26□□□□□ -0.29
NACAE9PAV3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.26□□□□□ -0.29
NACAE9PAV3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NACAE9PAV3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
NACAE9PAV3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.26□□□□□ -0.29
NACAE9PAV3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NACAE9PAV3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.26□□□□□ -0.29
NACAE9PAV3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NACAE9PAV3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NACAE9PAV3 AC008556.1-201ENST00000610908 2040 ntBASIC13.26□□□□□ -0.29
NACAE9PAV3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.26□□□□□ -0.29
NACAE9PAV3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NACAE9PAV3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms